Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2877 |
Symbol | |
ID | 8378569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3260702 |
End bp | 3261766 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645002109 |
Product | chorismate synthase |
Protein accession | YP_003159368 |
Protein GI | 256830640 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGGAA ACACTTTCGG CAGCATCTTC AAACTGACGA CCTTCGGCGA ATCCCATGGC CCGGCCCTGG GCGGAGTGGT GGACGGATGT CCCGCCGGGA TCGCCCTCAG CGAGGCCAGC ATCCAGACGG AGCTTGACAA ACGCAGGCCC GGCCAGGGTG GCCCGGCCGT CACCGCCCGC AGCGAGCCGG ACCGTATCCG GCTTTTGTCC GGAGTCTTTG AAGGCCGCAG CACAGGCACG TCCATCGGCT TCATCATCGA AAACACGGAC CAGCGCTCCC ATGATTACGG CGAGATCAAG GACGTGTTCC GGCCGGGTCA CGGCGACATG ACCTACCAGG CCAAATACGG CCTGCGCGAC TATCGCGGCG GAGGCCGTTC CTCGGGCCGG GAGACGGTGT CGCGCGTGGC GGGCGGAGCC GTGGCGGCGG CGTTTCTGCA GACGCTGGGG ATCACTGTCC GGGCCGCCGC CGTGGAGCTT GGCGGCATCG CGTGCCAGAG CGTCGATCTG GAAGGCGCCG AGCACCGCCC CTTCTTCGCG GCCGAAGACG ACGCGGTCCT GCGCTGGCAG GAGAGGGTCA AAGACGTCGC GGCTCAAGGC GACACCCTGG GCGGCATCGT CGAGATCCGC GCCTGCGGAG TGCCGGTCGG ACTGGGCGAG CCGGTCTTTG ACAAGCTCGA TGCCCGTCTG GCCGCGGCGC TGATGAGCGT GGGGGCGGTC AAGGGAGTCG AGATCGGCGG CGGATTCGCG GCCAGCCGCA TGCTCGGCAG CGAAAACAAC GACGCCATGC TGGATTCGGG GTTTGCGTCC AACAATGCCG GCGGAATCCT GGCCGGAATC TCAAGCGGCC AGGAAATCGT GCTGCGCGCC GCCATCAAAC CCATCCCCTC CATCGCGCTC GAGCAGCGGA CCCTGGACCG CTTCGGGACA GCGCGGACCA TCCGCGTCGG CGGACGGCAC GACATCTGCG CCATCCCCCG CGTGGTCCCG GTGCTCTGCG CCATGGCCAA ACTGGTTCTG GCCGACATGG TCCTGTTGCA ACGGCGCATG GGAGTCGGCA CATGA
|
Protein sequence | MAGNTFGSIF KLTTFGESHG PALGGVVDGC PAGIALSEAS IQTELDKRRP GQGGPAVTAR SEPDRIRLLS GVFEGRSTGT SIGFIIENTD QRSHDYGEIK DVFRPGHGDM TYQAKYGLRD YRGGGRSSGR ETVSRVAGGA VAAAFLQTLG ITVRAAAVEL GGIACQSVDL EGAEHRPFFA AEDDAVLRWQ ERVKDVAAQG DTLGGIVEIR ACGVPVGLGE PVFDKLDARL AAALMSVGAV KGVEIGGGFA ASRMLGSENN DAMLDSGFAS NNAGGILAGI SSGQEIVLRA AIKPIPSIAL EQRTLDRFGT ARTIRVGGRH DICAIPRVVP VLCAMAKLVL ADMVLLQRRM GVGT
|
| |