Gene Dbac_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2877 
Symbol 
ID8378569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3260702 
End bp3261766 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content68% 
IMG OID645002109 
Productchorismate synthase 
Protein accessionYP_003159368 
Protein GI256830640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA ACACTTTCGG CAGCATCTTC AAACTGACGA CCTTCGGCGA ATCCCATGGC 
CCGGCCCTGG GCGGAGTGGT GGACGGATGT CCCGCCGGGA TCGCCCTCAG CGAGGCCAGC
ATCCAGACGG AGCTTGACAA ACGCAGGCCC GGCCAGGGTG GCCCGGCCGT CACCGCCCGC
AGCGAGCCGG ACCGTATCCG GCTTTTGTCC GGAGTCTTTG AAGGCCGCAG CACAGGCACG
TCCATCGGCT TCATCATCGA AAACACGGAC CAGCGCTCCC ATGATTACGG CGAGATCAAG
GACGTGTTCC GGCCGGGTCA CGGCGACATG ACCTACCAGG CCAAATACGG CCTGCGCGAC
TATCGCGGCG GAGGCCGTTC CTCGGGCCGG GAGACGGTGT CGCGCGTGGC GGGCGGAGCC
GTGGCGGCGG CGTTTCTGCA GACGCTGGGG ATCACTGTCC GGGCCGCCGC CGTGGAGCTT
GGCGGCATCG CGTGCCAGAG CGTCGATCTG GAAGGCGCCG AGCACCGCCC CTTCTTCGCG
GCCGAAGACG ACGCGGTCCT GCGCTGGCAG GAGAGGGTCA AAGACGTCGC GGCTCAAGGC
GACACCCTGG GCGGCATCGT CGAGATCCGC GCCTGCGGAG TGCCGGTCGG ACTGGGCGAG
CCGGTCTTTG ACAAGCTCGA TGCCCGTCTG GCCGCGGCGC TGATGAGCGT GGGGGCGGTC
AAGGGAGTCG AGATCGGCGG CGGATTCGCG GCCAGCCGCA TGCTCGGCAG CGAAAACAAC
GACGCCATGC TGGATTCGGG GTTTGCGTCC AACAATGCCG GCGGAATCCT GGCCGGAATC
TCAAGCGGCC AGGAAATCGT GCTGCGCGCC GCCATCAAAC CCATCCCCTC CATCGCGCTC
GAGCAGCGGA CCCTGGACCG CTTCGGGACA GCGCGGACCA TCCGCGTCGG CGGACGGCAC
GACATCTGCG CCATCCCCCG CGTGGTCCCG GTGCTCTGCG CCATGGCCAA ACTGGTTCTG
GCCGACATGG TCCTGTTGCA ACGGCGCATG GGAGTCGGCA CATGA
 
Protein sequence
MAGNTFGSIF KLTTFGESHG PALGGVVDGC PAGIALSEAS IQTELDKRRP GQGGPAVTAR 
SEPDRIRLLS GVFEGRSTGT SIGFIIENTD QRSHDYGEIK DVFRPGHGDM TYQAKYGLRD
YRGGGRSSGR ETVSRVAGGA VAAAFLQTLG ITVRAAAVEL GGIACQSVDL EGAEHRPFFA
AEDDAVLRWQ ERVKDVAAQG DTLGGIVEIR ACGVPVGLGE PVFDKLDARL AAALMSVGAV
KGVEIGGGFA ASRMLGSENN DAMLDSGFAS NNAGGILAGI SSGQEIVLRA AIKPIPSIAL
EQRTLDRFGT ARTIRVGGRH DICAIPRVVP VLCAMAKLVL ADMVLLQRRM GVGT