Gene Dbac_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2875 
Symbol 
ID8378567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3259246 
End bp3259992 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID645002107 
Producthemolysin A 
Protein accessionYP_003159366 
Protein GI256830638 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGA AAGTCGATCG GGCCGACGTG GTCCTGGCCG AGCAGGGGCT GGTCGAGAGC 
TGCGAAAAGG CCACGCGCAT GATCATGGCC GGGCAGGTAT TCCTGCTCCG GAACGGGGCC
AGGACCCTCG TGGCCAAGCC CGGGCAGCAG ATCCCCTGCG ACGCGCGGCT GGAACTCAAG
GAATCGGAGC GTTTCGTATC GCGCGGCGGC TACAAGCTGC TCACGGCCCT GGAGCATTTT
GCCCTGGACG TGAGCGGCAT GGTCGCCCTG GACGCCGGGG CCTCCACCGG CGGGTTCACG
GACTGCCTGC TGCAGTTCGG GGCCGCGCGG GTTTACGCCG TGGACGTGGG GCACGCGCAG
CTGCACTGGA AGCTGATCCG CGACCCACGC GTCATCAACA TGGAGCGGAT CAACCTGCGC
CATGCCACAG CAAACCTCCT CCCTGAAAAA GTGGATCTGG TGGTGGCTGA CTGCTCCTTC
ATTTCCCTGC GGCTCATCCT GCCCCCCTGC CTGCAGTTTT TAAAGGACGC AGGGCAGATT
TTGGCCCTGG TCAAACCGCA GTTCGAGCTG GCGCCCGAGC ATGCGATCAA GGGCGTGGTC
CGCTCGGAAG AATTGCAGCT CAAAGCCGTG GCCGAGGTGC AGGCCTTCGC CGCGGAGGAG
CTCGGGCTGC AGGTTATGGG CTCCGTCCCG GCAGGAATCA AGGGCCCCAA AGGCAATCAG
GAGTACCTGC TCCATTTGCG CCGCTGA
 
Protein sequence
MAKKVDRADV VLAEQGLVES CEKATRMIMA GQVFLLRNGA RTLVAKPGQQ IPCDARLELK 
ESERFVSRGG YKLLTALEHF ALDVSGMVAL DAGASTGGFT DCLLQFGAAR VYAVDVGHAQ
LHWKLIRDPR VINMERINLR HATANLLPEK VDLVVADCSF ISLRLILPPC LQFLKDAGQI
LALVKPQFEL APEHAIKGVV RSEELQLKAV AEVQAFAAEE LGLQVMGSVP AGIKGPKGNQ
EYLLHLRR