Gene Dbac_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2870 
Symbol 
ID8378562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3253236 
End bp3253934 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content61% 
IMG OID645002102 
ProductHhH-GPD family protein 
Protein accessionYP_003159361 
Protein GI256830633 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGGG AAGCCACGCT TCGTGACTAC TACCAGGCGA TGCTGGCCGC GCTGGGCCCA 
AGCCGGTGGT GGCCGGGGCG AACGCCGTTC GAGATCGCGC TGGGCGCCAT TTTGACCCAG
AACACGGCCT GGACCAATGT GGAAAAGGCG ATGCACGCCC TGCGCGAATC CGGATTGCTC
GATCCCCGGG CTCTCGCCCG GTTGACCGAT GAGGAGTTGG CGACGTTCAT CCGGCCGGCC
GGAGCCTTCC GGGTCAAAGC GGCGCGGGTG CGCAATTTCC TGCTTTTTTT GCACAGGACC
TGCGATCTGG ACATGGACGG ATTGCGGGGA GAGACGGTGG AGACGCTTCG CCCGGCGCTG
CTTGAGGTTT CCGGCATCGG ACCTGAAACT GCCGATTCCA TCCTGCTCTA CGCCCTCGGT
CTACCGTCCT TTGTGGTCGA CGCCTACACG CGCCGCATCC TGAATCGGCA CGGGCTTGTA
CCCGAAGATA TCGCATACGG GGAACTGCGG GAATTTTTCA TGGATGTGTT GCCGCCGGAC
CCGGCGTTAT ATAATGAATA TCACGCCCTC ATCGTGCGCA CGGGCAAGAA TTGGTGTGCA
AAGAGGCAGG GAAAGTGTCC GGACTGTCCC CTGGCCGTCT TTTTGGAAGA GTTCAGCCCC
TTGACCTGCA CAGGAAAAAG CATCATCCCT CACCCATGA
 
Protein sequence
MNREATLRDY YQAMLAALGP SRWWPGRTPF EIALGAILTQ NTAWTNVEKA MHALRESGLL 
DPRALARLTD EELATFIRPA GAFRVKAARV RNFLLFLHRT CDLDMDGLRG ETVETLRPAL
LEVSGIGPET ADSILLYALG LPSFVVDAYT RRILNRHGLV PEDIAYGELR EFFMDVLPPD
PALYNEYHAL IVRTGKNWCA KRQGKCPDCP LAVFLEEFSP LTCTGKSIIP HP