| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2866 |
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| Symbol | |
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| ID | 8378558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3247974 |
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| End bp | 3249320 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645002098 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_003159357 |
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| Protein GI | 256830629 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0488494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCGC TTACGCCTTC TTCATGCATA AATGTCCTCC TTGGAATTTC CAGGGGACTT
TCGCATCGGA CCAGCATTCA AAAGACGCTG GAAGAAATCT GCATCCATGT GGAAAGCTAT
TTTTCCCCCA GGCATTTGGC TTTTTTGCTT GTGGACCCGG ACACCGGCGA CCTGACTTTC
AATCACGTCG TGGGTGAAAA GACAGATTTG GTCAGCGGTA AGAAATTGCG AAAGGGTACG
GGGCTGGCCG GATGGGTCGC CGAGACCCAA GAAGCCCTGC TGATCGAGGA CGCGGCGAAA
GATCCGCGTT TCGCTACACA ATTTTTGACG GCCAAGACCA AGGGCTGTTC AACCGTCATG
GCTGTCCCGC TCAAAAGCGG GGATATGGTC TACGGCGTCT TGGAACTCAT CGACACCCGG
CACGGGGAAC CGTTTACAAA GAAGGCTCTG GCGGATTTCG CAGCCATCGC GGAGGTCACG
GCCGTTGCGC TGGAGCGGGC ATATTATTTT CAGGCCATGA GGCGCATGGC CGAAACGGAT
CAGCTCTCCG GGTTGCCGAA CAAGCGGACT TTCGACCGCT TCATGGAACG TGAGATCGAG
GTCTGCAAGC GATACGGCAC TCCGTCGAGC GTGGTGCTGC TCACGATCGA GAATCTGCGC
AGGCTCAACG AGGAATACGG ACCGTCGAGC GTGGACAAGA TCATCCAGAT GCTTGCGGTA
GTTCTGGTCG ATGAAGTGCG AAAGGTCGAT GTGGCATGCC GCATCGCCTC GAACAGATTC
GCGGTGATCA TGCCCAATAC GCCCCGGCCG GCCGCCCTCG ATGTCAGCCA GCGCATCAAC
ACCAAGATCG CCCAGCAAAG TGCGACCAGG CAGATGCCGT ATTTTTCCGT AATTCTTGAT
GTCGTGTCCG GCATTCAGGA CGACGTCACT CCGCTGCTGG GGATTTGCGA CACAAACAAG
ACCGCGTCCC GAGGCTTTCG CAAATTTCGC AACGTGGCCG AAAATCTTGT GCTGCTCCTC
AACGAGGAAA AGCAGGCCAT GGAGCGCAGG CAGTATTACC GCAAGAATGT GCAGCTCGCT
GGGCAGTTCG AGAATCCGGA TACGGGCGAG ACGGGTGATT TCCTGCTGGA TAATATTTCC
TTGAATGGCG TCGGGTTCAC CACGCTGCTC TCCCATCGCC TGGTTCGAGG GGCTCTGATC
AAGGTTCGTT TTCGTCTGGA CGACTCGCGA CGTACGGAAG TCACCCGCCT GACCCGTGTC
AAATACCTGA GCGAGAGGTA TGTCGGATGC CAGTTCGCGG ACCAGAAAAG CTATGACAGC
GATCTCGGCT TTTATTTGAT GCGCTGA
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| Protein sequence | MEPLTPSSCI NVLLGISRGL SHRTSIQKTL EEICIHVESY FSPRHLAFLL VDPDTGDLTF
NHVVGEKTDL VSGKKLRKGT GLAGWVAETQ EALLIEDAAK DPRFATQFLT AKTKGCSTVM
AVPLKSGDMV YGVLELIDTR HGEPFTKKAL ADFAAIAEVT AVALERAYYF QAMRRMAETD
QLSGLPNKRT FDRFMEREIE VCKRYGTPSS VVLLTIENLR RLNEEYGPSS VDKIIQMLAV
VLVDEVRKVD VACRIASNRF AVIMPNTPRP AALDVSQRIN TKIAQQSATR QMPYFSVILD
VVSGIQDDVT PLLGICDTNK TASRGFRKFR NVAENLVLLL NEEKQAMERR QYYRKNVQLA
GQFENPDTGE TGDFLLDNIS LNGVGFTTLL SHRLVRGALI KVRFRLDDSR RTEVTRLTRV
KYLSERYVGC QFADQKSYDS DLGFYLMR
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