Gene Dbac_2840 details

Gene Information

• Locus tag: Dbac_2840
• ID: 8378531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 3219828
• End bp: 3220340
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 645002071
• Product: peptide deformylase
• Protein accession: YP_003159331
• Protein GI: 256830603
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAGAA CAATAGTTAC ATATCCCAAC CCGGTGCTGG CCAAAAAGGC CGCGCCGGTG 
GTAGAGATAA CGGAAGAGAT ACGCGCCCTG GCGGCCGAGA TGCTTGAAAT CATGTACGCG 
GACAAGGGCA TCGGCCTCGC CGCGCCCCAG GTGGCGGAAA GCATCCGCCT CATCACCGTG 
GACCTGAGCG GCCCGGACAA ACGCGAAGAC CCGCACGTCT TCGTCAATCC CGTCCTCTCG 
AACCTTGAGG GCGAAGTGGA ATCCGAGGAA GGGTGCCTGT CCGTTGTCGG CTACCGCACC 
ACGGTGAAAC GCGCCGAACG GCTGCACCTT TCGGCCACGG ACCTTGACGG CAAGCCGGTT 
GAAATGGATG CCGACGATCT CATGGCCATC TGCCTGCAAC ACGAGGTGGA TCACCTCGAC 
GGCGTGCTGT TCATCGACAA GATCAGCAAA TTGAAGCGCA CCCTGTACGA GAGAAAGCTC 
AAAAAATGGC TGAAAGAGAA AAACGAAGAT TGA 

 

Protein sequence

MPRTIVTYPN PVLAKKAAPV VEITEEIRAL AAEMLEIMYA DKGIGLAAPQ VAESIRLITV 
DLSGPDKRED PHVFVNPVLS NLEGEVESEE GCLSVVGYRT TVKRAERLHL SATDLDGKPV 
EMDADDLMAI CLQHEVDHLD GVLFIDKISK LKRTLYERKL KKWLKEKNED