Gene Dbac_2830 details

Gene Information

• Locus tag: Dbac_2830
• ID: 8378521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: -
• Start bp: 3207483
• End bp: 3209378
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 645002061
• Product: signal transduction histidine kinase, nitrogen specific, NtrB
• Protein accession: YP_003159321
• Protein GI: 256830593
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3852] Signal transduction histidine kinase, nitrogen specific
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACCT CCTCTCGAAT CCTCTCAACC GATGTCAGCG GACGACTGGG TCGCAAACTG 
CTGTTCTGGA TTCTGCTCGG GAGCACCGTG TTCACGCTGC TCGGCACTGC GGTGCAGCTG 
ACATTCGACT ACCGCAACGA CAAGGAAGCC ATGCTCGCGC AGCTGGAGCA GATCCGCACA 
TCGCGCCTGT CCAGCCTGAC CAGCGCCCTG TGGCATCTGG ACGAAGCGCA GGTTCTGGTC 
CAGCTTGAAG GGATTCTGGA GATGCGGGAC ATCATGTACG CAGAGGTGAT CACTCCAGAG 
GGGATACGGT ATTTCCGTGG CAAGCAGGCC GAAGAGAAGA ACCTGTACGT GCAAAAATTT 
CCTCTCCAGT ACAGGGCCCT GGAGCGCATA GATCTGATCG GCACACTCAT CGTCGCCGCC 
GACAAGAGCG CCCTCCAGCG CAGGCTGCGG GACAAGATTC TGGTCATCGG CATCACCCAG 
GGCGTGCAGA TATTTCTGGT GGCCGTCCTT GTTGTCTTCA TTTTTTACAT GCTGGTCACC 
CGCCATTTGC GCCGGATGGC TCTTTACACC TCCGGGCTGA CCATTGACAG ATTGCAGGAG 
CCGCTCTCGC TGGACAAGAC CTCGTCCAAG CCCGACGAGA TCGATATTGT GGTCCGCGCC 
TTCAACGACA TGCGCGAGAA CCTGCTCCGG GATATCAAGC ACCGGGAAAA GGCCGAGCAG 
AAGCTCAAAG AGGCCGAAGG CTACATCCGC AACATTCTTG ATTCGATGCC GTCGATTCTG 
ATCTCTGTCG ATGTGGACGG CCGCGTGACC CAATGGAACC AGCAAGCGGT ACTCAAAACC 
GGTGTTTCGG CGGAAGAGGC CATGGGGCGT CGTGTCACGG ATGTGTGTCC AAATGCTCCG 
GTCAGCATGG ATCAGGTCAG GGCTGCGGTA AGTTCCGGGC TCCCGGTCAA GATACCCAAG 
GTGCCCAGAA AAAAGGAAGA CATGGTCGAG TATATGGATG TCACGGTCTA TCCCCTGACG 
ACCAACAATG TGCAAGGTGC GGTTATCCGC ATAGACGATG CCACGGAGCG GGTGCGGCTC 
GAAGAAATGC TGATCCAGTC GGAGAAGATG ATTTCCGTCG GCGGTCTCGC TGCGGGCATG 
GCCCACGAGA TCAACAATCC TCTGGCTGGA ATTTTGCAAA ACGGGCAGGT CATCAGAAAC 
AGGATGTCTC TGGAGTTGCC CGCGAACAGG AAGCTGGCGG AAGAGCTTGG AACCGACATG 
GCCTTGATTC ATGGCTATTT TGAGCGCCGC GGCTGCCTAC GCATGATGGA TTCGATCATG 
GATTCGGGTT TGCGGGCCGC GCGGATAGTG GAGAACATGC TTTCTTTCAG CCGCAAGAAC 
ACGTTGCGCA TGGCCGAGGT CGATATCTGC GGCCTGCTGG ATCGCACTCT TGAACTTGCG 
GCCAATGACT ATGATCTCAA AAAGCAGTAT GACTTCCGCA AGATCAGGAT TGTCCGCGAA 
TATGAGGAAA ACCTGCCACT GATCTGTTGC GAGGAAAGCA AGATTCAGCA GGTCTTCTTC 
AACCTGATCC GTAACGGAGC GCAGGCCATG GGATCGCAGG ACCGCCCTCC CTGCTTCATT 
CTGCGGGTCA TGAAGGCCGG CAAAGAGGTG CGGATTGAGA TCGAGGACAA TGGCCCGGGC 
ATGTCCGAAG AGTTGCGCAA AAGGGTTTTC GAGCCCTTTT TTACCACCAA ACGGGTGGGG 
GAAGGCACCG GCCTTGGCCT TTCCGTGTCC TATTTTCTGA TAGTTGAAAA TCATGGCGGC 
AGGATTGATG TGGACTCCAG TCCCGGCAAG GGCTCTGTCT TCATCATTCA TCTGCCTCTC 
GTTCCGGCTG ACCAGGACGC CGACGGAGCT TCATAA 

 

Protein sequence

MATSSRILST DVSGRLGRKL LFWILLGSTV FTLLGTAVQL TFDYRNDKEA MLAQLEQIRT 
SRLSSLTSAL WHLDEAQVLV QLEGILEMRD IMYAEVITPE GIRYFRGKQA EEKNLYVQKF 
PLQYRALERI DLIGTLIVAA DKSALQRRLR DKILVIGITQ GVQIFLVAVL VVFIFYMLVT 
RHLRRMALYT SGLTIDRLQE PLSLDKTSSK PDEIDIVVRA FNDMRENLLR DIKHREKAEQ 
KLKEAEGYIR NILDSMPSIL ISVDVDGRVT QWNQQAVLKT GVSAEEAMGR RVTDVCPNAP 
VSMDQVRAAV SSGLPVKIPK VPRKKEDMVE YMDVTVYPLT TNNVQGAVIR IDDATERVRL 
EEMLIQSEKM ISVGGLAAGM AHEINNPLAG ILQNGQVIRN RMSLELPANR KLAEELGTDM 
ALIHGYFERR GCLRMMDSIM DSGLRAARIV ENMLSFSRKN TLRMAEVDIC GLLDRTLELA 
ANDYDLKKQY DFRKIRIVRE YEENLPLICC EESKIQQVFF NLIRNGAQAM GSQDRPPCFI 
LRVMKAGKEV RIEIEDNGPG MSEELRKRVF EPFFTTKRVG EGTGLGLSVS YFLIVENHGG 
RIDVDSSPGK GSVFIIHLPL VPADQDADGA S