| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2822 |
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| Symbol | |
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| ID | 8378513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3198819 |
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| End bp | 3200474 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002053 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_003159313 |
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| Protein GI | 256830585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTT ATGATTACAT CATTGTCGGC GGCGGCTCCG CCGGCAGCGT CCTGGCCAAC
CGTCTCAGCG CCAACCCCAA AACCAGCGTC CTGGTCCTTG AAGCGGGCCT GCCCGACTTC
CGCCTTGATT TCCGCATCCA CATGCCTGCG GCCCTGACCT ATCCCCTGGC CGGAAAGACC
TACAACTGGT GGTACGAATC CGAGCCGGAA CCGCACATGC ACAACCGGCG CATCTACCAG
CCGCGCGGCA AGGTGCTGGG TGGATCAAGC TGCATCAACG GCATGATCCA CATTCGCGGC
AACGCCATGG ATTATGAGAA ATGGGCCCGT GAAAAGGGCC TGGAGAACTG GGATTATGCC
CGCTGCCTGC CGTACTTCAA GCGCTTTGAA TACCGCCTTA AAGGTACGGA CGAATATCAG
GGCGGCGCAG GCCCGCTGTA TCTGACCAGC CCGGATTGCG ACAATCCGCT CTTCGACGCC
TTTTTCCAGG CCGTGCAGGA GGCCGGATAC CCCCTGACCG ACGTCAACGG CTATCAGCAG
GAAGGGTTCG GCAAGTTCGA CCGCACCACC TACCGCGGCC GGCGCTGGAA CGCGGCCCGG
GCCTACGTCC ACCCGGTCAA GAACAGGCGC AACCTGACCG TCAAATGCAA GGCCACGGCC
CATCGCATCC TTTTTGAAGG CACCCGCGCC ATAGGCGTGG AATACGAACG CCTGGGCCGC
ATGCACCGCG TGAACGGCGG CGAGATCATC AGCTGCGGCG GGGCCATCAA TTCCCCGCAG
CTTCTGCAGC TCTCCGGCAT CGGCAACGGC TCGGAGCTTC GCGAGCTGGG CATCCCCGTA
GTCCACGACC TGCCGGGCGT GGGCGAGAAC CTGCAGGACC ATCTGGAACT CTATGTGCAG
TACGCCTGTA CCAAGCCGGT CAGCATGTTC CCGGCGCTCC AGTGGTGGAA TCAGCCCTGG
ATCGGACTGA AATGGCTTTT CGGCCAGACC GGCGAGGCAG CCACCAACCA TTTCGAGGCC
GGCGGCTTCG TGCGCGGCAA CGACCAGGTC GAGTACCCGA ACATCCAGTA CCACTTTCTG
CCCATCGCCA TCCGGTATGA CGGGTCTTCG CCCAACGCGG GGCATGGTTA TCAGGTCCAC
GTCGGCCCCA TGAACACCGA CGTGCGTGGT CACGTGAAGA TCAAAAGCTC CGATCCCAAA
GAATACCCGT CCATCCTGTT CAACTATCTG TCCACGGAAC AGGAACGCCG GGACTGGGTC
GATGCAATCC GCCTGACCCG AAAGATCATG ACCCAACCCG CCTTTGACAG CTTGCGCGGC
CGGGAACTGG CCCCGGGCGA AGACGTGCAG ACCGACGAGG CGATCCTCGA TTTCGTGGCC
CGGGAAGGCG AGAGCGCCTA CCACCCGAGC TGCACCTGCA AGATGGGCTA CGACGACATG
GCCGTGGTCG ACAGCGAACT GCGCGTGCAT GGCGTGCAGG GACTGCGCGT GGTCGACGCC
TCGATCATGC CCTATGTGAC CAACGGCAAC ATTTACGCGC CGGTGATGAT GATCGCCGAG
AAGGCGGCCG ACCTGATCCT TGGCAACACG CCGCTCGCCC CCGACACCGC GCCCTTCTAC
CGGCACGAAA AAAGCACGGC CAAGGAGAAG AAATGA
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| Protein sequence | MKFYDYIIVG GGSAGSVLAN RLSANPKTSV LVLEAGLPDF RLDFRIHMPA ALTYPLAGKT
YNWWYESEPE PHMHNRRIYQ PRGKVLGGSS CINGMIHIRG NAMDYEKWAR EKGLENWDYA
RCLPYFKRFE YRLKGTDEYQ GGAGPLYLTS PDCDNPLFDA FFQAVQEAGY PLTDVNGYQQ
EGFGKFDRTT YRGRRWNAAR AYVHPVKNRR NLTVKCKATA HRILFEGTRA IGVEYERLGR
MHRVNGGEII SCGGAINSPQ LLQLSGIGNG SELRELGIPV VHDLPGVGEN LQDHLELYVQ
YACTKPVSMF PALQWWNQPW IGLKWLFGQT GEAATNHFEA GGFVRGNDQV EYPNIQYHFL
PIAIRYDGSS PNAGHGYQVH VGPMNTDVRG HVKIKSSDPK EYPSILFNYL STEQERRDWV
DAIRLTRKIM TQPAFDSLRG RELAPGEDVQ TDEAILDFVA REGESAYHPS CTCKMGYDDM
AVVDSELRVH GVQGLRVVDA SIMPYVTNGN IYAPVMMIAE KAADLILGNT PLAPDTAPFY
RHEKSTAKEK K
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