Gene Dbac_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2774 
Symbol 
ID8378458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp3151201 
End bp3151833 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content52% 
IMG OID645001999 
Productribosomal protein L3 
Protein accessionYP_003159266 
Protein GI256830538 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.039291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CTTTGGGAAT CGTTGGGCGC AAGATCGGCA TGACCAGAAT TTACGGAGCT 
GACGGAAACG TCATCCCCGT AACGGTTATT CAGGCCGGTC CCTGCCCAGT TATTGAAAAA 
AAGGTCAGCG AAAAAGACGG GTACACTGCG ATACAGGTTG GTTTTGAAGA AGTGGCTGCA 
CATCGACTGA CCAAACCCGA GCAGGGCCAT CAGCAAAAGG CAAATTGTGG CTTTTACAAA 
ATGCTGAAGG AAATCCGTCT TGGAAGCGTT GATGAATATG AAATCGGTCA GAAGCTGACC 
GTCGAAATGT TCACTCCCGG CGAAAAGATT CGCGTTACCG GCACATCCAA GGGTCGCGGG 
TTCGCAGGCG TCATCCGCCG CTGGAATTTC AGCGGAGCTC CTGCTTCACA CGGACACGAA 
AAGGTCCACA GAAAGCCCGG CTCGATCGGT CAGTGCGCCT GGCCGAGCAA GGTTTTCAAG 
GGAAAGAAAA TGCCGGGTCA GCTTGGAAAC AAGACCGCCA CAATGCTCAA TCTTGAGATT 
GTCGACGTCC GCCCGGAAGA TAATGTCGTG CTTGTACGCG GCCAAGTTCC AGGACCCAAG 
CAGGGGATCG TCGTCCTCAG CAAGATGAAG TAA
 
Protein sequence
MKKTLGIVGR KIGMTRIYGA DGNVIPVTVI QAGPCPVIEK KVSEKDGYTA IQVGFEEVAA 
HRLTKPEQGH QQKANCGFYK MLKEIRLGSV DEYEIGQKLT VEMFTPGEKI RVTGTSKGRG 
FAGVIRRWNF SGAPASHGHE KVHRKPGSIG QCAWPSKVFK GKKMPGQLGN KTATMLNLEI 
VDVRPEDNVV LVRGQVPGPK QGIVVLSKMK