| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2724 |
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| Symbol | |
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| ID | 8378408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3114145 |
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| End bp | 3114957 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645001949 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003159216 |
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| Protein GI | 256830488 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCTCC TAGGCATCAT CGGCCACCCG CTCTCGCACA CCTTGAGCCC CATCCTGCAC
AACTGGGGGT TCCGGGAAAT GGGCATCAAG GCCTCCTACC ACGTCTGGGA CACCCCGCCC
GAAAAGCTCC TCTCCTTCAT GGCCGCCCTG CGCACTCTGC CCATCCACGG GACCAGCGTG
ACCATCCCGC ACAAGGAGAC GGTCATGCCC CTGGTCGACA AGCTGACGCA AAGCGCCCGC
GACATCGGTG CCGTAAACAC CCTCTACTGG CACGACAAGG TGCTGTGGGG CGACAACACG
GATGTGACCG GGTTCATGGC CCCGCTCCTG GAGCGCGGGA CGCAGCCGGG CACGGTGCTG
GTCCTGGGCG CAGGCGGGGC CGCCCGCGCG GCGGTCTGCG GCCTGCACAG CGCAGGATGG
AAGGTGCTTC TTTCCGCGCG CACGGGAGGC CGGGCCGACC GCCTGGCCCA ATCATTCCAG
GCCGAGCATG TGCCCTGGGC CGACCGGCAC GAAGTGCGGC CGCACCTGCT GGTCAACACC
ACCCCGCTTG GCATGTCCGG GCCCTTCCAG GCCCTCTCGC CCTGGAAATC GTCCCTGGCG
GGCATATCCC TGGTCTACGA CCTGGTCTAC AACCCCAAGG AAACCCAGCT GCTGGCCCAG
GCCCGGCGTG AAGGCGTGGA GATCATTCCC GGCTTGCCCA TGTTCGTGCA TCAGGGGCTG
GCCCAATTCG AACGCTGGAC CGGACAGCGC TTCCCCCTGG CCCGCGCCAT CTCCCTGCTT
GAAGAAACAC TGGCCGGCCG GAGCAAGGCA TGA
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| Protein sequence | MLLLGIIGHP LSHTLSPILH NWGFREMGIK ASYHVWDTPP EKLLSFMAAL RTLPIHGTSV
TIPHKETVMP LVDKLTQSAR DIGAVNTLYW HDKVLWGDNT DVTGFMAPLL ERGTQPGTVL
VLGAGGAARA AVCGLHSAGW KVLLSARTGG RADRLAQSFQ AEHVPWADRH EVRPHLLVNT
TPLGMSGPFQ ALSPWKSSLA GISLVYDLVY NPKETQLLAQ ARREGVEIIP GLPMFVHQGL
AQFERWTGQR FPLARAISLL EETLAGRSKA
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