| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2639 |
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| Symbol | |
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| ID | 8378323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3019078 |
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| End bp | 3021459 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645001865 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_003159132 |
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| Protein GI | 256830404 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC TCCGCAGGAT CGCGGCGACG CCATCGCGCA AGGCCGCCGC GATCCTTTTT
TTGACCCTAG GGCTTGCGGC CTGCCTGGGC CTGCTGCTGG ACCGCCTCTT CCCCTTTCCC
GTGGAACGCC TTGAGGCTCC GGCCGCCACC CGCGTCCTGG ACCGGGACGG CAAACCCTTG
CGCTTTTTCC TGGCTGCCGA CGGGATGTGG CGATTCCCGT TGACTCTGAA GGAAATTTCC
CCGGACCTGA CCGCCGCCCT GATCGATTCC GAAGACCGGC ATTTCCTCCT TCATCCGGGC
ATCAACCCGC TGTCCGTATT ACGTGCGCTG TGGGTCAACG TCCGGCATGG ACGGGTCATA
AGCGGAGCCT CGACCATCCC CATGCAGGTC GCCCGCCTGG CCGACCCGCG CCCGCGCACC
CTTGGGGCCA AGGCCGTGGA AGCGCTGCGC GCCCTGCAGC TGTGCTGGCA TTATCCCAAG
GAAAAAATTC TGCTGTGGTA CGTCAATCTG GCTCCGTTCG GCTCCAACAT GGTCGGAGTC
GGAGCCGCCG CCTGGTATTA TTTCGGCAAG GCCCCGGACA CCCTCTCCCT CGGGGAGATC
GCCCTGCTCT CTGTCCTGCC GCGCTCGCCG ACCCGCTACA ACCCGCTCAG CAACCCAGAG
CGTGCACGCG AAGTCCGCGA CCGGGTCCTG GAGCGCTTTG CCGCGCATGG CGTCTTCGAC
CCGGCCCGTA TCACCGAAAG CACGACCCGC CCGCTTCTGG CCCGCCGCGC TAGCGTGCCG
CAGGGCGCGC CACACTTCAG CCGCTGGGTG CGTTCGCGGC TGCCCGAAGC GCCCGTAATC
AGAAGCAGCC TGGACAGACG CGCCCAGAAT ATCGTCGAAG AGCTGCTCTC CGGCCGCATG
GACAACTTGC GCCGTCAGGC CATCGGCAAC GCGGCGGCGG TGGTGCTCGA CATCAAAAGC
CGCGCGATTC TGGCTTATGC CGGATCGGCG GATTTCTGGG ATGATTCCCG GCAGGGGCAG
GTCGACAACG CCCTGTCCAG GCGCTCTCCC GGATCGACGT TAAAACCCTT CCTCTACGCC
CTGGCCTTTG ACCAGGGGCA TCTCGTGCCC GACTCCATGC TCCTTGACGT GCCCACGGAT
TTCGCGGGCT ACGTCCCGGA AAACTACGGC CAGAATTTTC AGGGCCTCGT CAGCGCGCGC
ACGGCCCTGG CCACCTCCCT CAATGTTCCG GCCGCGCGCC TGCTGACCCG CTGCGGGCTT
GTGCCCTTCC ACGAACTGCT GCGCCGGGGC GGCCTTTCCA CCCTGGACAG ACCGGCCAGC
CACTACGGGC TGTCCATGGC CCTGGGCGGC TGCGAGGTGC GGCTGCTGGA GCTGACCAAC
CTTTACGCCA CCCTGGCCGA CACAGGGGTG CACAGAGCCG TCCGCCCCCT GGCCGGAGGT
AAAGACGAAT ACAGCAAGGG CGTGCAGCTT TTCTCCCCCG AAGCCTCGGC CATGATTCTT
GGCATCCTGG CCACGACCAG AAGGCCCGAC CTGCCCGACG CCTGGGAGTT CACCCTGTCC
GCCCCCAAGG TGGCCTGGAA GACCGGGACG TCCTTCGGAC ACCGCGACGC CTGGGCCGTG
GGCATAAGCC GCGACCTGGC CATCGGGGTC TGGGTCGGCA ACCCCGACGG CTCGCAGTGC
ACGAACATCT CCGGAGCGCG CCACGCCGGT CCCCTGCTTT TTGATCTTTT CCGAGCGCTC
TCTCCCCGCA CAACGCAGCT GCCCTCGTTT CCCACGCCCG CGCTGCAACG GATCCAGCTC
TGCGCCGTCA GCGGGGAGCG CCCCGGCCCC AGCTGCCCGG TCACCACGAG CACGGCCATC
GCCGGGGTGA CGAGCCTCCC GGTCTGCGGC ATGCACAGAC AGATCTTCGT AAATCCCGCC
ACGGGCCTGC GCCTGCACGG AGACTGTCTG CTCGCAAAGG AATCCACAGA AGAGGCCGCG
CTGGTCTGGC CGGCCGAACT GGTGGCCTTT CGCCGTGCCC AGGGATCGGG CCTGCCGGGC
CTGCCCGGCA TCGACCCGGA GTGCCTTGAC GTGCCGGAGG AAGGCGGCCC GGTCATCCAG
TCCCCTTCAG CCACAACGCC CTACCATGTC CGCCCTGACG CGCCCTCGGA GTTTCAGCGC
CTGTCCCTGT CCGCGGCCGG GGCGGCGGGC GCTTCGATAC ATTACTGGTA CGTGGATGGC
CGTCATGTGG GCCGGACCGC GCCCGAAACA CCCTGCTTCA TCCCTTTGGA GCGCGGGATG
CACGAGGTCA TCGTCACCGA TGACCAGGGG CGCAGCGCCC GCACGACCTT CACGGTGCAC
GCCTGGACCG ACGACGCCCT TGGCAGCCGG GTTCAGCCCT GA
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| Protein sequence | MNRLRRIAAT PSRKAAAILF LTLGLAACLG LLLDRLFPFP VERLEAPAAT RVLDRDGKPL
RFFLAADGMW RFPLTLKEIS PDLTAALIDS EDRHFLLHPG INPLSVLRAL WVNVRHGRVI
SGASTIPMQV ARLADPRPRT LGAKAVEALR ALQLCWHYPK EKILLWYVNL APFGSNMVGV
GAAAWYYFGK APDTLSLGEI ALLSVLPRSP TRYNPLSNPE RAREVRDRVL ERFAAHGVFD
PARITESTTR PLLARRASVP QGAPHFSRWV RSRLPEAPVI RSSLDRRAQN IVEELLSGRM
DNLRRQAIGN AAAVVLDIKS RAILAYAGSA DFWDDSRQGQ VDNALSRRSP GSTLKPFLYA
LAFDQGHLVP DSMLLDVPTD FAGYVPENYG QNFQGLVSAR TALATSLNVP AARLLTRCGL
VPFHELLRRG GLSTLDRPAS HYGLSMALGG CEVRLLELTN LYATLADTGV HRAVRPLAGG
KDEYSKGVQL FSPEASAMIL GILATTRRPD LPDAWEFTLS APKVAWKTGT SFGHRDAWAV
GISRDLAIGV WVGNPDGSQC TNISGARHAG PLLFDLFRAL SPRTTQLPSF PTPALQRIQL
CAVSGERPGP SCPVTTSTAI AGVTSLPVCG MHRQIFVNPA TGLRLHGDCL LAKESTEEAA
LVWPAELVAF RRAQGSGLPG LPGIDPECLD VPEEGGPVIQ SPSATTPYHV RPDAPSEFQR
LSLSAAGAAG ASIHYWYVDG RHVGRTAPET PCFIPLERGM HEVIVTDDQG RSARTTFTVH
AWTDDALGSR VQP
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