| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2634 |
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| Symbol | |
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| ID | 8378318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3008324 |
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| End bp | 3010204 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645001860 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003159127 |
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| Protein GI | 256830399 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGG ATAATCCCAA TAACAGCGAG CCCGCCAGCC ACGGCGAACT CATCGACATC
CTTATCAAAG AAGGGTTGCT CTCGGAAAAA CAGGCGCTCC ATGCGGCGCG GCTACGTACA
AAGCTCGTCC GCCCCAAACC TTTGCTCGAA ATCGTCAAGG AACTCGGGTA CGTCACCGCC
GACCAGGTCA CCGCTGCCAT CCGCAAGAAC AAGCTGTCCA TGCGCATCGG AAGTTTGCTG
CTGGAACTCG GACTGATCAG CGAGGCAGAC CTTGAAGCCG CCTTCCAGAT CCAGCGCACG
AGCAAGACCC CGCAAAAGCT TGGCGAAGTC CTCGTCAACA ACAATTTCAT CAAGGAATTC
AAGCTCCTTG AAGCGCTCTC CATGCAGCTT GGCTACCCCT TTGTCGATCC CAGATTCACC
AACCTCGACG TCTCCCTTCT GCATCAGATT CCGGTCACGT ACAGAAACAA GGCATCCTAT
GTGCCCATCG AGAGACAGGA GCATCAGGTC GTCGTGGCTT TTGCCAATGT GCTGGACATG
GACGACCAGG AGGAGGCGCG CACCATTTTT CCCGAAGGGA TTCTGCCGGC CATCGCCACG
CGGGAGTCCA TCATCGAGAC CTACCAGCGC TTCGAACGCG GATCACAGAC CAAGGAATCT
CTTGATGACG ATTCGGCCTC GGGCATCGTC GAACGCATCA TCCTCGACGC CATCGAACTC
GACGTCAGCG ACATCCACAT GGAACCCCTC CCCGACCGCC TGCGCATCCG CTTCCGCCGG
GACGGGGTGC TTGAACCCTA CAAGGACTTC CCGCGCGAGA TAATCCCCAA CATCTCAAGC
CGCATCAAGA TCATGTGCAA GGCGGATATC GCCGAGAAGC GCCGCCACCA GGGCGGACGC
ATCCTGTTCG AATACCCCGG CGGCGAACTC GACATGCGCG CCTCCTTTTA CGTGACCATC
CACGGCGAGG CCATCGTGCT GCGGTTGCTG AACCGGCAGG GCAACCTCAT CGACATCGCA
AGCGTCGGGA TGTACCCGAA GATTCTCAAG CGCTTCCTTG AAGGTGCGCT GTCCAGACCC
AGCGGCGTCG TGATCATCAC CGGTCCCACC GGGTCGGGCA AGACGACTAC GGTCTACAGC
TGCATCCACC ACCTGAACAC GCCGCTCCTG TCCATCATCA CGGCCGAAGA GCCCGTTGAA
TACGTCATAC CGGGCATCTC CCAGTGTTCC ATCGATCCCA AGATCAACCT GACCTTCGAG
GAGACCCTGC GTCACATCGT GCGCCAGGAC CCCGACGTCA TCCTCATCGG CGAGATCCGC
GACAATTATT CGGCGGAGGT GGCCGTGCAG GCGGCGCTGA CCGGGCACAA GGTCCTGACC
ACCTTCCACA CCGAAGACTC CATCGGCGGC CTGATCCGGC TCATGAACAT GGACATCGAG
GCCTTCCTCA TCTCCTCCAC CGTGGTCAGC GTGGTTGCAC AGCGCCTGCT GCGGCGCATC
TGCCCGGAGT GCTCCCAGCC GTACAAGCCA AGCCCCGGCG AGCTGCAGCT CTTCGGCTAC
ACACAGGCCA CGATCCAGGG CTCGAATTTT CGCAAGGGCA CGGGCTGCGC CCACTGCCGC
TACACAGGGT ATCGAGGCCG CATCGCGGTG TTCGAACTGC TCATTCTCGA TGAAATGGTC
CGTGCCGCCA TCCTGGAGCG GCGGACCAGC TTCGACATTC GCAAGATCGC CCTGGAGAGC
GCGGGGCTTG TGACCTTGTT CGAGGAAGGT TTGGTCAAGG CCGCCGAAGG CCAGACCACT
CTGGAAGAGG TCATGCGCTG CCTGCCTCTC GTTCTGAAAC CACGCCCACT GGAAGAAACC
CGCCGCCTGC TCGGAGTTTA G
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| Protein sequence | MPKDNPNNSE PASHGELIDI LIKEGLLSEK QALHAARLRT KLVRPKPLLE IVKELGYVTA
DQVTAAIRKN KLSMRIGSLL LELGLISEAD LEAAFQIQRT SKTPQKLGEV LVNNNFIKEF
KLLEALSMQL GYPFVDPRFT NLDVSLLHQI PVTYRNKASY VPIERQEHQV VVAFANVLDM
DDQEEARTIF PEGILPAIAT RESIIETYQR FERGSQTKES LDDDSASGIV ERIILDAIEL
DVSDIHMEPL PDRLRIRFRR DGVLEPYKDF PREIIPNISS RIKIMCKADI AEKRRHQGGR
ILFEYPGGEL DMRASFYVTI HGEAIVLRLL NRQGNLIDIA SVGMYPKILK RFLEGALSRP
SGVVIITGPT GSGKTTTVYS CIHHLNTPLL SIITAEEPVE YVIPGISQCS IDPKINLTFE
ETLRHIVRQD PDVILIGEIR DNYSAEVAVQ AALTGHKVLT TFHTEDSIGG LIRLMNMDIE
AFLISSTVVS VVAQRLLRRI CPECSQPYKP SPGELQLFGY TQATIQGSNF RKGTGCAHCR
YTGYRGRIAV FELLILDEMV RAAILERRTS FDIRKIALES AGLVTLFEEG LVKAAEGQTT
LEEVMRCLPL VLKPRPLEET RRLLGV
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