Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2628 |
Symbol | |
ID | 8378312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 2996323 |
End bp | 2999031 |
Gene Length | 2709 bp |
Protein Length | 902 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645001854 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003159121 |
Protein GI | 256830393 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATC GCCTGTTGCA TGGCTCCATC AAAAAAAAGC TCGCCATCCT CTTTCTCATG GCGGCGCTCC CCGCCATCGT CATCATTGTC TTTGCCGGGC TGGACAACCG GCGCCGGGCG GTCTCCAACG CCGAACAGGA ATTGCAGGCT TTTTCCCGCC ATCTGGCTGA AACCCAGATA CAGACCACTC TGGCCACAAA AGCGTTCCTT GAAGGCCTGG CCATGCTGCC CGAAGTGCGC CAGGTCGACA CAGAGGCATG CAATCGTCTC TTCGCCAACC TGCTCAAAAT AAATCCGGGC TACGCCGCCC TCCACCTGGT TGACCCAAGC GGTAATCTTG TAGCATCCGG CAACGCGCGC AAACCTGCGA ACTTCGCCCA CACGAGGCAT TTCAAGGACG CGCTCTCCAC AACGGCCTTC GCCGCCGGCG AATATATCCT CGGCGTGACC CTGCACATTC CGGTCTTCAC CTTCGGGTAT CCCGTCCTGA ACGACCGGGG CGAAACCAAG GGTATCCTCC TGACCTCGAT CCGCCTCGAC ACGTATGGGG ACTTGTTCAA GCACACCCGC TTTCCGGAAA ATTCTTTCGT CGGAGTCTGC GACAGGAACG GGCTGCGGCT CTTCCGTTAT CCCGAAAACT CCGCAAGCGG CCTTGGCGAA CCAATCAAAC CCTCGGTCTT TGCGCACGCC GTATCCGGGC CTTCGGAAGG ATTGCTCCTG GAAACAGGCA CGGACGGCGT CACGCGCATC CTCGCATTCC AGAAGCTGCG CCTAGCCCCG GACGCTCCCC CCTACATGTA CTTCTTTGTC GGCGCGCCCA GCGCCATGTT CTACGCCAAC GCGAAAAGCG GGATGCTGCG CGATTTCATC ATCCTGTTTC TGACCATCGG CCTGACCATG CTGAGCGGCT GGTTTCTTGG CGGCAGGACG GTTGGAATGC GGCTTGAAGA ATTGGCCAAG GCCTCAAAAC AGATCGGCGA AGGCGATCTC TCGGTCAGAG TGGCGGCTGC GCCCGAAATC ACCGAGGTTG ACGTGCTCTC CAGCGCATTC AACAAAATGG CCGAATCCCT GACGCTCGAC ATTGCCAGGC GCACGCAGGC CGAAAAGGCC CTGCTGGAAA GCGAATCCCG GTTTCGCAAA CTCTTTGAAC AGGTCCCGGC AATCGCCGTT CAAGGCTACG GGATGGACGG CATCGCGCGT TACTGGAACC AGGCCTCGGA AAATCTTTAC GGATACAGCG CGGACGAAGC GATCGGGGCA AAACTGACCG ACCTGATCAT CCCGCCTGAA ATGCGCACGG ACGTCGAAGC CGCCATGCGT TCCATGGGAG AAACAAAAAT CCCCATCCCT GCCAGCGAAC TGACTCTCAT GCGCAAGGAC GGCTCCCGGG TCGTGGTCTT TTCCAGCCAT GCCATCGTCG AGAAGGCGGG AGGCGAACCG GAGCTCTTTT GCGTCGACAT CGACCTGACC AGCAGAAAAG AGGCCGAGGA GGCCCTGCTC AAGCTTAAAG ATGCCGCGGA AGCCGCCAAC CAGGCCAAGA GCGAATTTCT GGCCAACATG AGCCACGAGA TCCGCACCCC TATCAACGGG GTCATGGGCA TGCTCCAGCT TCTGGAAACC ACCCCCCTTG ATGCCGAGCA GGCCAGCTAC ATCCACATGG CCGCAGAGGC CGCCAACCGC CTGACCAGAC TCCTGACGGA CATTCTCGAT CTCTCCAGGG TGGAGGCGGG CAAGATGGAG ATCCGCGAAG CTCCCTTCCA CATCCAGGAC ATCATCGATT CCGTGACCGG ACTTTTCGCC GTCACGGCCA GAAACAAAGG CCTGATTCTG GAATGCAGGC TTGCCCCGGA CATGCCCGGA ATTTTGCTCG GGGATGAAAT GCGGATACGC CAGGTGCTCT TCAATCTGGT GGGCAACGCC CTCAAATTCA CGGAACGCGG CAGGGTCGAG ATGGATATCT CGGCTCTGTC CGCAAAGGAC GAAGACACCT GCCGCGTGCA TTTGTGCGTC ACGGACACGG GCATCGGCAT CGCCGAAGAC AGGCTTGGCG AGATCTTCGA ACCGTTCAGG CAGGTCGAAA ATTCCTTCAC CCGCAATTAC CAGGGCGCAG GCCTGGGGCT GTCCATCGTG CACAGGCTGG TCGCCCTCAT GGCTGGAACC ATCAGCATAG AGAGCGCTCC GGGCGAAGGC ACGAGCGTGC ATGTCGTCCT GCCCTTGCGG GCGCTCAAGG TCGATGCGTC AAACCTCGTG AGCGCATCGA CCGGCGACAG CGATGCCTGC TTACGAGTGC TTCTGGTCGA GGACGACCCG TCCAATCGAA TTCCCACCCA AAAGCTGCTG GAGAAGGCCG GACATACGGT CATCCTGGCC GAAAACGGGC GGCAGGCCCT TGACCTGCTG GAGGCAAACG ACATCGACTG CATACTCATG GACGTGCAGA TGCCCGTCAT GAGCGGAGTC GAGGCGACAC GCATCATCCG CGGCTCCACC ACGCTGGGCG CGAAAAGGGA CATCCCCATC ATCGCCCTGA CCGCCTATGC CATGGCCGGT GACAAGGAAG CTTTTCTGGC CGCCGGAATG AACGGATATG TCGCCAAGCC GGCGACCCTT GAAGAAATGA CGCAGGCCAT GCGAAAAGCC ATGGGCGTTG AGCCGGCGGG CGATGCCGCG TCTGCGGGGC ATCCGGACTC CACTTTTGAT TTGCCCTAA
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Protein sequence | MFDRLLHGSI KKKLAILFLM AALPAIVIIV FAGLDNRRRA VSNAEQELQA FSRHLAETQI QTTLATKAFL EGLAMLPEVR QVDTEACNRL FANLLKINPG YAALHLVDPS GNLVASGNAR KPANFAHTRH FKDALSTTAF AAGEYILGVT LHIPVFTFGY PVLNDRGETK GILLTSIRLD TYGDLFKHTR FPENSFVGVC DRNGLRLFRY PENSASGLGE PIKPSVFAHA VSGPSEGLLL ETGTDGVTRI LAFQKLRLAP DAPPYMYFFV GAPSAMFYAN AKSGMLRDFI ILFLTIGLTM LSGWFLGGRT VGMRLEELAK ASKQIGEGDL SVRVAAAPEI TEVDVLSSAF NKMAESLTLD IARRTQAEKA LLESESRFRK LFEQVPAIAV QGYGMDGIAR YWNQASENLY GYSADEAIGA KLTDLIIPPE MRTDVEAAMR SMGETKIPIP ASELTLMRKD GSRVVVFSSH AIVEKAGGEP ELFCVDIDLT SRKEAEEALL KLKDAAEAAN QAKSEFLANM SHEIRTPING VMGMLQLLET TPLDAEQASY IHMAAEAANR LTRLLTDILD LSRVEAGKME IREAPFHIQD IIDSVTGLFA VTARNKGLIL ECRLAPDMPG ILLGDEMRIR QVLFNLVGNA LKFTERGRVE MDISALSAKD EDTCRVHLCV TDTGIGIAED RLGEIFEPFR QVENSFTRNY QGAGLGLSIV HRLVALMAGT ISIESAPGEG TSVHVVLPLR ALKVDASNLV SASTGDSDAC LRVLLVEDDP SNRIPTQKLL EKAGHTVILA ENGRQALDLL EANDIDCILM DVQMPVMSGV EATRIIRGST TLGAKRDIPI IALTAYAMAG DKEAFLAAGM NGYVAKPATL EEMTQAMRKA MGVEPAGDAA SAGHPDSTFD LP
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