| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2584 |
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| Symbol | |
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| ID | 8378263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2944372 |
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| End bp | 2946099 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645001805 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003159077 |
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| Protein GI | 256830349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTT TCAGTGAAGA GACCGAACTC GGATATCTGT TTGGCGTCAT CCGGCGTCGT
ATCTGGCAGA TGGTTTTGCC GGCCGTTGCC GTGTTTGTCG TGGTTGCGGT GGTGGTGGCT
TTGTTGCCGG CCAAATATGA GTCCTCGGCC ACGATTTTGA TCGAGGGCCA GGAGGTGCCG
CAGGAGCTGG TGCGTTCCAC CGTGACCGGG TTCGTGGAAG AGCGGCTGCA GACCATCACG
CAGGTGGTGC TGAACCGCGC CAATCTGATG AGCATCATCG ACCGCGTCGG CCTGTACCAG
GATCAGCGCA AGAGCATGAC CTCCGAGGCC CTGGTCGAGA TGATGCGTAA AGACATAACC
ATGGAGCCCA TCCAGGCCGA AGTCATGAGC AACACGGGCC GCCCCGCCAC GGCGACCATC
GCCTTTTCCG TGGCCTTCGA GGGCACCGAG CCCGCCAAGG TGCTGCAGAC CACCAACACG
CTGGTCTCGC TTTTTCTGGA GGAGAATCTC AAGAATCGCG AGGAAAAGGC GTCCACGGCC
TACTCTTTTC TCGAAAAGCA GCTCGTGGCC TTGCGTGACG AAGTGGCCCA GTCCGAGGAG
CTCATCGCCC GCTTCAAGGA GGAGCATCTG GGCTCCCTGC CGGAGCTGAC CCAGCTCAAC
CTGCAGACGC TGGAGCGCAT CGAGCGCGAT GCGCAGGCCG TGCAGGAGAA TATTCGCGGT
ATCCTGGAGC GTCGGGCCTT TCTGGAAGGG CAGTTGGCCA CGGTCACGCC GCAGCGCACC
CTGGTCACGG CCGAAGGCGG GCGCGTGCTG CCCCCGGCCG AGGAGCTGCG GGCGCTCAAG
ACCAGGTACG TGTCGCTCAC GGCCACGCAT TCGGACAAGC ACCCGGAGGT CATCAAGCTG
CGCGAGCAGA TCGCGGCCCT GGAGGGCAGC GGCGTAAGCG TGGACCTGGC CGAGGAGCTG
GCGGCCGCAC GCGCCAACTT GGCGGACCTG AATGCCAAGT ATGGCCTGAA ACACCCGGAC
GTGCAGGCGG CCGAGCGCCG CGTGGCGGCC CTGGAGAAGA GCGGCGCGGG ACGCAGTCGC
ATGGTGGCCA GTTCCGTGGC CGACAGCGCG GACAACCCGG CCTGGATGGC CCTCAAAAGC
CAGCTGCAGG CCACGGACAT GGATCTGCGC AGCCAGCAGG TCATGCTCGC GGACCTGCGC
CTTCGCCAGG ACGAGCTGAC CCGCCGCCTG GAGAACACGC CAAGGGTCGA GCAGGAATAC
CGCAAGCTGG AGCGCGATCA TCAGAACGCC CAGCTCAAAT TCCAGGAGAC CTCGCAGAAG
CTCATGGCCG CGCGGGATTC CAAGGAACTG GAAGAGGAGC GGGCGGGCGA GAAGCTGACC
CTGATCGAAC CGCCCATGCT CCCGGAAGTG CCTTCCAAGC CCAAGCGCAT GCTGCTCATG
CTGGTCGGTT TCGTCATGTC GCTGGGCTTC GGGGCCGGCT GCGGCGCCCT GGCCGAGGCC
ATGGACGGCT CGGTGCGCGG GCTGCGCAGC CTGCACGCCC TGACCAAGGT TCCGCTCCTG
GGGTCCATCC CCTACGTCGC CACGGGCGCT GAAGTGGCCC GGCGCAAACG CAAGATCACC
ATGGCCGTGA CGGGAATGGC GGGGGCGCTT GCCGTGCTGG TACTGCTCAT CCACGTGTAT
GTGCGGCCCT TGGATATTAT TTTTTATCAG ATTCTGGATC GGTTTTAG
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| Protein sequence | MTSFSEETEL GYLFGVIRRR IWQMVLPAVA VFVVVAVVVA LLPAKYESSA TILIEGQEVP
QELVRSTVTG FVEERLQTIT QVVLNRANLM SIIDRVGLYQ DQRKSMTSEA LVEMMRKDIT
MEPIQAEVMS NTGRPATATI AFSVAFEGTE PAKVLQTTNT LVSLFLEENL KNREEKASTA
YSFLEKQLVA LRDEVAQSEE LIARFKEEHL GSLPELTQLN LQTLERIERD AQAVQENIRG
ILERRAFLEG QLATVTPQRT LVTAEGGRVL PPAEELRALK TRYVSLTATH SDKHPEVIKL
REQIAALEGS GVSVDLAEEL AAARANLADL NAKYGLKHPD VQAAERRVAA LEKSGAGRSR
MVASSVADSA DNPAWMALKS QLQATDMDLR SQQVMLADLR LRQDELTRRL ENTPRVEQEY
RKLERDHQNA QLKFQETSQK LMAARDSKEL EEERAGEKLT LIEPPMLPEV PSKPKRMLLM
LVGFVMSLGF GAGCGALAEA MDGSVRGLRS LHALTKVPLL GSIPYVATGA EVARRKRKIT
MAVTGMAGAL AVLVLLIHVY VRPLDIIFYQ ILDRF
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