Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2579 |
Symbol | |
ID | 8378258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2935351 |
End bp | 2937711 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645001800 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_003159072 |
Protein GI | 256830344 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGGG TTTTATGTTT TTTGCTTCTG GTCATGATGC TCGGTGCTTG TGGATCCAAG GAGAACCGCA GGGATGGGTT TTATGCCAAC GGCCTCAAGT TCGAGGAGGC GGGTCGCTTT TCCGAGGCCA GGGTTGAGGG AAGGAATGTC ATCAAGCTCG ACCCCAATCA TGTCGGCGCG CACCTGCTGC TCGCCCGTTG CGCGTTGAAG GAGCAGAATT GGCGTGAAGC CTTCGGGAAT TTTCAGCGGG CCGTGGAGCT TGAGCCCGCC AATACGGAGG CCCTGCTCGG AGTGGGGCGC CTGTACCTGC TATCCGGCGA TACGAACCAG GCTGAAGCGC ATGCGGGTCA GGTGCTGGCA TTGGACCCAC AGTCCGTGGA TGGATTGTTG CTGCGGGCCG GAGCCATGCT GCGCGCCAAG CGTTTTGAAG AAGCCGGCCG GCAGTTGGAT CTGGTCTTTG CCAAAGACCC GGCAAACGAG GATGCGCTGC TGGCGCTTTC GGTCATCCAT TCTGAACAAG GAAGAAACTC AGATGCGCTG GCCGTGATTG GCAAGGGAAT TGGTAAGAAG CCGGACAGCA GGCCGCTGCA TTTCCGCGCG GCAAGCCTGG CTGCGGACAT GGAAGATTAC GCCGCGGCCG AGCAGCATCT TTTGAAGCTC AAAGAGCTCG ACCCCGCCAA CAGGGGCGTG CAGATCCTGC TGGCGGCGCT TTATGAGCGC ATGGGGCAGA ATGGGCGCGT GGAGGGTATC CTGCGGGAGC TTCTCGCGGC CGAACCCGGC TCGGAAGAGG GGCGGCTGCG CTTGATGGAC TACCTGATGC GCACCGGAAA GGCTGAGGAC GCGCTTGCAG TGGCGCAAGA AGGAGAGCCG TCGCCCAAGC TGCGGCTGGC TTCCGCCGCG GTGCTTTTGA CCGTGGGGCG GGCCGATGAG GGTGAAGCGG CTCTGGTCGC CCTGGCTGGG GATAAAGAGG CGGGCCCGGC GGGCATCGAG GCACGGCTGC GCATGTCCGA GATCAAGCTG CGCCGGGGCG ACCGCGACGG GGCCCTGGCC GAGGTGGACG AGGTGCTGCG CCTCAACCCC GCCGACGCCC GCGCCCATGC CGCGCGCGGA CGCATCTTCA TGCTGCAGGA CCGCTTCGAA GAAGCGTTGG CCGAGCTGCG CATCGCCCTG CACGACGCCC CCGACGACAT GGCCGTGGCC GTGCTCATGG CCCGCGCCCA GTTCGCGCTG GGCAACACCC TGTCCGGGGT GGAGGCGCTG CGCAATTTTC TTCTGAAGAA GCCGGACGCC GTGCCCGTGC GCCTGGAACT GGCCGCGCAT CATCAGCGGG CAGGTGAGCC CGACGCGGCC CTGGCCGTGT TGCAGGGCGG TGAGAATGGC GGCAGGATGC CCGCCCAGTT GATGCTGGCC ATGGGCGATA TCGAGGCGCG GCGCGAACAT TTCGACGCGG CCGAGATCTA CTACCGGCAG GCCGCTCAGG AGAACGAGGC GCACGCTCCG GCCTTGTTGC GGCTGGGCAG CATGCACGGC GGCCGCAAGG ACTGGGATGC GGCGCGGCGG ACCTTCGACG AGCTGCTCCT GGCCAGTCCC GATGCCCACG GCGGCGCCGA AGGCGTGGTG GCGGTGGAAC TGGCTGCGGG GCGGGGCGAG GCGGCTCTGG CCTGGGCGGC GGAGCGGTCC GCGTCCCGGC CTTCGGACCC GCTGGCCGCG GATCTGCAGG GGCGCACGGC CCTGCGCCTA GGCAATGTGG ACGAGGCGGA AAAAGCCTTT CGCGAAGCCC AGCGGCGCGC CCCGGAATGG TCCGTGCCCT CGGCCAGGCT GGCCGGGCTG TACGCGTCCA CGGGCCGCAA GGATACGGCT GTGGCGGAAT GCCGCGCGGC CCTGGCCAAG AACCCGGACT CCGTGCCGGA GGGCCTGCTG CTGGGTCAGT TACTGCAGCT GGGCGGGGAA ACGGCCGAGG CCGAGGCCAT CTTTCGCAAG CTCCTGGCCC GCCATCCGGA CCTGCTGCCC GCAGCCAACA ACCTGGCCTA CCTGCTGGTT TCTCATGACG CGCCCACAAC GGAGCAGCTG AGCGAAGCGT TGGCATTGGC CACGCGTGCC AGCGCGGGCG GCGACCCGTC GGCGCTGGAT ACGGTGGGCT GGGTGCATTA CCGCCTGGGC GACAAGGACG CGGCCCTGCA GTTCCTGCGC AAGGCCCACG AATCCCTGCC CGAGGACCCG GCCGTGACCT ACCACCTGGC CCGGGTCCTG GCCGATCTTG GGCAGACCGG GGAAGCGCGC GAGCTGCTCA CGGCCCTGCT GGCCCGCACT CAGGATTTTC CGGAACTGAC CCGTGCCCGT GAGCTGTTGG CGAGCATCTG A
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Protein sequence | MQRVLCFLLL VMMLGACGSK ENRRDGFYAN GLKFEEAGRF SEARVEGRNV IKLDPNHVGA HLLLARCALK EQNWREAFGN FQRAVELEPA NTEALLGVGR LYLLSGDTNQ AEAHAGQVLA LDPQSVDGLL LRAGAMLRAK RFEEAGRQLD LVFAKDPANE DALLALSVIH SEQGRNSDAL AVIGKGIGKK PDSRPLHFRA ASLAADMEDY AAAEQHLLKL KELDPANRGV QILLAALYER MGQNGRVEGI LRELLAAEPG SEEGRLRLMD YLMRTGKAED ALAVAQEGEP SPKLRLASAA VLLTVGRADE GEAALVALAG DKEAGPAGIE ARLRMSEIKL RRGDRDGALA EVDEVLRLNP ADARAHAARG RIFMLQDRFE EALAELRIAL HDAPDDMAVA VLMARAQFAL GNTLSGVEAL RNFLLKKPDA VPVRLELAAH HQRAGEPDAA LAVLQGGENG GRMPAQLMLA MGDIEARREH FDAAEIYYRQ AAQENEAHAP ALLRLGSMHG GRKDWDAARR TFDELLLASP DAHGGAEGVV AVELAAGRGE AALAWAAERS ASRPSDPLAA DLQGRTALRL GNVDEAEKAF REAQRRAPEW SVPSARLAGL YASTGRKDTA VAECRAALAK NPDSVPEGLL LGQLLQLGGE TAEAEAIFRK LLARHPDLLP AANNLAYLLV SHDAPTTEQL SEALALATRA SAGGDPSALD TVGWVHYRLG DKDAALQFLR KAHESLPEDP AVTYHLARVL ADLGQTGEAR ELLTALLART QDFPELTRAR ELLASI
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