| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2579 |
|---|
| Symbol | |
|---|
| ID | 8378258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2935351 |
|---|
| End bp | 2937711 |
|---|
| Gene Length | 2361 bp |
|---|
| Protein Length | 786 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645001800 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_003159072 |
|---|
| Protein GI | 256830344 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGGG TTTTATGTTT TTTGCTTCTG GTCATGATGC TCGGTGCTTG TGGATCCAAG
GAGAACCGCA GGGATGGGTT TTATGCCAAC GGCCTCAAGT TCGAGGAGGC GGGTCGCTTT
TCCGAGGCCA GGGTTGAGGG AAGGAATGTC ATCAAGCTCG ACCCCAATCA TGTCGGCGCG
CACCTGCTGC TCGCCCGTTG CGCGTTGAAG GAGCAGAATT GGCGTGAAGC CTTCGGGAAT
TTTCAGCGGG CCGTGGAGCT TGAGCCCGCC AATACGGAGG CCCTGCTCGG AGTGGGGCGC
CTGTACCTGC TATCCGGCGA TACGAACCAG GCTGAAGCGC ATGCGGGTCA GGTGCTGGCA
TTGGACCCAC AGTCCGTGGA TGGATTGTTG CTGCGGGCCG GAGCCATGCT GCGCGCCAAG
CGTTTTGAAG AAGCCGGCCG GCAGTTGGAT CTGGTCTTTG CCAAAGACCC GGCAAACGAG
GATGCGCTGC TGGCGCTTTC GGTCATCCAT TCTGAACAAG GAAGAAACTC AGATGCGCTG
GCCGTGATTG GCAAGGGAAT TGGTAAGAAG CCGGACAGCA GGCCGCTGCA TTTCCGCGCG
GCAAGCCTGG CTGCGGACAT GGAAGATTAC GCCGCGGCCG AGCAGCATCT TTTGAAGCTC
AAAGAGCTCG ACCCCGCCAA CAGGGGCGTG CAGATCCTGC TGGCGGCGCT TTATGAGCGC
ATGGGGCAGA ATGGGCGCGT GGAGGGTATC CTGCGGGAGC TTCTCGCGGC CGAACCCGGC
TCGGAAGAGG GGCGGCTGCG CTTGATGGAC TACCTGATGC GCACCGGAAA GGCTGAGGAC
GCGCTTGCAG TGGCGCAAGA AGGAGAGCCG TCGCCCAAGC TGCGGCTGGC TTCCGCCGCG
GTGCTTTTGA CCGTGGGGCG GGCCGATGAG GGTGAAGCGG CTCTGGTCGC CCTGGCTGGG
GATAAAGAGG CGGGCCCGGC GGGCATCGAG GCACGGCTGC GCATGTCCGA GATCAAGCTG
CGCCGGGGCG ACCGCGACGG GGCCCTGGCC GAGGTGGACG AGGTGCTGCG CCTCAACCCC
GCCGACGCCC GCGCCCATGC CGCGCGCGGA CGCATCTTCA TGCTGCAGGA CCGCTTCGAA
GAAGCGTTGG CCGAGCTGCG CATCGCCCTG CACGACGCCC CCGACGACAT GGCCGTGGCC
GTGCTCATGG CCCGCGCCCA GTTCGCGCTG GGCAACACCC TGTCCGGGGT GGAGGCGCTG
CGCAATTTTC TTCTGAAGAA GCCGGACGCC GTGCCCGTGC GCCTGGAACT GGCCGCGCAT
CATCAGCGGG CAGGTGAGCC CGACGCGGCC CTGGCCGTGT TGCAGGGCGG TGAGAATGGC
GGCAGGATGC CCGCCCAGTT GATGCTGGCC ATGGGCGATA TCGAGGCGCG GCGCGAACAT
TTCGACGCGG CCGAGATCTA CTACCGGCAG GCCGCTCAGG AGAACGAGGC GCACGCTCCG
GCCTTGTTGC GGCTGGGCAG CATGCACGGC GGCCGCAAGG ACTGGGATGC GGCGCGGCGG
ACCTTCGACG AGCTGCTCCT GGCCAGTCCC GATGCCCACG GCGGCGCCGA AGGCGTGGTG
GCGGTGGAAC TGGCTGCGGG GCGGGGCGAG GCGGCTCTGG CCTGGGCGGC GGAGCGGTCC
GCGTCCCGGC CTTCGGACCC GCTGGCCGCG GATCTGCAGG GGCGCACGGC CCTGCGCCTA
GGCAATGTGG ACGAGGCGGA AAAAGCCTTT CGCGAAGCCC AGCGGCGCGC CCCGGAATGG
TCCGTGCCCT CGGCCAGGCT GGCCGGGCTG TACGCGTCCA CGGGCCGCAA GGATACGGCT
GTGGCGGAAT GCCGCGCGGC CCTGGCCAAG AACCCGGACT CCGTGCCGGA GGGCCTGCTG
CTGGGTCAGT TACTGCAGCT GGGCGGGGAA ACGGCCGAGG CCGAGGCCAT CTTTCGCAAG
CTCCTGGCCC GCCATCCGGA CCTGCTGCCC GCAGCCAACA ACCTGGCCTA CCTGCTGGTT
TCTCATGACG CGCCCACAAC GGAGCAGCTG AGCGAAGCGT TGGCATTGGC CACGCGTGCC
AGCGCGGGCG GCGACCCGTC GGCGCTGGAT ACGGTGGGCT GGGTGCATTA CCGCCTGGGC
GACAAGGACG CGGCCCTGCA GTTCCTGCGC AAGGCCCACG AATCCCTGCC CGAGGACCCG
GCCGTGACCT ACCACCTGGC CCGGGTCCTG GCCGATCTTG GGCAGACCGG GGAAGCGCGC
GAGCTGCTCA CGGCCCTGCT GGCCCGCACT CAGGATTTTC CGGAACTGAC CCGTGCCCGT
GAGCTGTTGG CGAGCATCTG A
|
|---|
| Protein sequence | MQRVLCFLLL VMMLGACGSK ENRRDGFYAN GLKFEEAGRF SEARVEGRNV IKLDPNHVGA
HLLLARCALK EQNWREAFGN FQRAVELEPA NTEALLGVGR LYLLSGDTNQ AEAHAGQVLA
LDPQSVDGLL LRAGAMLRAK RFEEAGRQLD LVFAKDPANE DALLALSVIH SEQGRNSDAL
AVIGKGIGKK PDSRPLHFRA ASLAADMEDY AAAEQHLLKL KELDPANRGV QILLAALYER
MGQNGRVEGI LRELLAAEPG SEEGRLRLMD YLMRTGKAED ALAVAQEGEP SPKLRLASAA
VLLTVGRADE GEAALVALAG DKEAGPAGIE ARLRMSEIKL RRGDRDGALA EVDEVLRLNP
ADARAHAARG RIFMLQDRFE EALAELRIAL HDAPDDMAVA VLMARAQFAL GNTLSGVEAL
RNFLLKKPDA VPVRLELAAH HQRAGEPDAA LAVLQGGENG GRMPAQLMLA MGDIEARREH
FDAAEIYYRQ AAQENEAHAP ALLRLGSMHG GRKDWDAARR TFDELLLASP DAHGGAEGVV
AVELAAGRGE AALAWAAERS ASRPSDPLAA DLQGRTALRL GNVDEAEKAF REAQRRAPEW
SVPSARLAGL YASTGRKDTA VAECRAALAK NPDSVPEGLL LGQLLQLGGE TAEAEAIFRK
LLARHPDLLP AANNLAYLLV SHDAPTTEQL SEALALATRA SAGGDPSALD TVGWVHYRLG
DKDAALQFLR KAHESLPEDP AVTYHLARVL ADLGQTGEAR ELLTALLART QDFPELTRAR
ELLASI
|
|---|
| |