Gene Dbac_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2561 
Symbol 
ID8378240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2921094 
End bp2922182 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content56% 
IMG OID645001782 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_003159054 
Protein GI256830326 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAAAG TAGCTCTCAT CACAGGCATC ACAGGTCAGG ATGGCGCATA TCTGGCGGAA 
TTTCTTCTTG AGAAAGGCTA TGAGGTGCAT GGCATCAAGC GCCGCGCATC GCTGTTCAAC 
ACTGATCGCA TCGATCATCT CTATCAGGAT CCGCATGAGA CCGGACGGCG TTTTGTTCTG 
CATTACGGCG ATCTGTCCGA TGCCACCAAC CTGATCCGCA TCATCCAGCA GGTCCAGCCT 
GACGAGATTT ACAACCTCGC TGCACAGTCT CACGTGCAGG TGTCTTTTGA TACGCCAGAA 
TACACGGCCA ACGTGGATGG TCTGGGTACG CTGCGTATTC TTGAAGCTAT CCGCATCCTG 
GGCCTGGAGA AGAAGACGCG TTTTTATCAG GCTTCCACCT CCGAGCTGTT TGGCCTGGTG 
CAGGAAGTCC CCCAGACTGA GAAGACGCCC TTTTATCCGC GCTCTCCCTA TGCCTGCGCC 
AAGCTTTTCG CCTACTGGAT CGCGGTCAAT TATCGCGAGG CATACGGCAT GTATGCGTGC 
AACGGCATCC TCTTCAACCA TGAATCACCC CTTCGCGGTG AGACCTTCGT TACCCGCAAG 
ATCACCCGCG CCTTGGCCCG TATCCATCTT GGCCTTCAGG ACTGCCTGCA CCTAGGCAAC 
CTGAACGCCT TGCGCGACTG GGGGCACGCC AAGGATTACG TGGAGATGCA GTGGCTCATG 
CTACAGCAGG ATTCGCCGGA CGACTATGTC ATCGCCACTG GTGAACAGCA TTCCGTGCGG 
GATTTCGTGC AGGCTGCTGC CAAGGAGCTG GGCATGACCA TTCAATTCTC AGGCGAAGGC 
CTGGACGAGA AAGGCGTCAA TCCGGCCAAT GGCAAAACGG TCGTGGCCGT GGACCCTCGC 
TATTTTAGGC CTACGGAAGT GGAGACGCTG CTGGGCGATC CGGCCAAAGG TAAAAAGCAA 
CTCGGCTGGA CCCCCAAGGT CCGCTTTGAG GAACTGGTAG CCGAGATGGT GCGGTTTGAT 
CTGGAAGACG CGAAAAAGGA AGAGTTGTGT GTGCGTGCTG GTTTTACTGT TAGCTCTCCG 
TGCGAGTAG
 
Protein sequence
MNKVALITGI TGQDGAYLAE FLLEKGYEVH GIKRRASLFN TDRIDHLYQD PHETGRRFVL 
HYGDLSDATN LIRIIQQVQP DEIYNLAAQS HVQVSFDTPE YTANVDGLGT LRILEAIRIL 
GLEKKTRFYQ ASTSELFGLV QEVPQTEKTP FYPRSPYACA KLFAYWIAVN YREAYGMYAC 
NGILFNHESP LRGETFVTRK ITRALARIHL GLQDCLHLGN LNALRDWGHA KDYVEMQWLM 
LQQDSPDDYV IATGEQHSVR DFVQAAAKEL GMTIQFSGEG LDEKGVNPAN GKTVVAVDPR 
YFRPTEVETL LGDPAKGKKQ LGWTPKVRFE ELVAEMVRFD LEDAKKEELC VRAGFTVSSP 
CE