| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2560 |
|---|
| Symbol | |
|---|
| ID | 8378239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2919933 |
|---|
| End bp | 2920940 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 645001781 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003159053 |
|---|
| Protein GI | 256830325 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CAGACAAGAT TCTAATAGCC GGTGCCGCCG GGATGGTCGG TAGTGCGATC
ATTCGCGCTC TTTTGGCGCA AGGCTTTCAG AATATCGTCG GGACCATTCA TAATGCTGCT
CCGGATTTTG GGGGGCGAGT AAGGCTGGAA ATGCTTGATT TACTGGATCA GGCTGCAGTC
CGTGATTTTT TTAAAGTGGA GCGTCCGGAT CATGTCTTTC TTGCAGCTGC AAAAGTCGGC
GGGATACATG CCAACAATAC CTATCCGGCA TCCTTCATCC ACGACAATCT GGTCATCCAG
TCCAATGTCA TCCATTCGGC CTATGAGTCA GGCGTTGATC GTCTGCTTTT TCTGGGATCG
TCCTGCATCT ATCCCAAGCT TGCCCCGCAG CCCATGCGCG AAGAGCATCT GCTGACCGGA
CCGCTGGAGC CGACCAACGA GCCGTATGCC CTGGCCAAGA TCGCCGGGAT CAAGATGTGC
GAGTCCTACA ATCGGCAGTA TGGCACCAAG TTCGTGGCCG TGATGCCGAC CAATCTCTAT
GGGCCGGGGG ACAATTTTCA TCCGGTGAAT TCCCATGTGT TGCCTGCGCT TATACGGCGG
TTTCATGAGG CCAAGGAGAG CGGGGTTGAA GAGGTGGTTG TGTGGGGGAC GGGGAATGCC
AGGCGGGAGT TTTTGCATGT GGATGACATG GCGCAGGCAT GCCTTTTTGT CTTGAATCTA
GAAGACGCGG TATTTGAACG GGAGCTTTTG AGCTACCCTA ATCCTTGTTT TGTGAATGTG
GGGTGTGGGG TAGATGTGAG TATTCTGGAG TTGGCCGAGA CCGTGGCCCG GATTGTGGGC
TATGACGGAA AGCTGTTTTT TGATGCCGAG AAGCCCGAAG GGACGCCAAA GAAACTTCTT
GATGCTTCAA GGCTGACCGG ACTTGGCTGG AAGGCTGAGA TTGGGTTGGA AGAGGGAGTG
GGGGGCGCTT ATCGGTGGTT TTTGGAGAAT GAGGGGACGC GGCAGTAG
|
|---|
| Protein sequence | MKITDKILIA GAAGMVGSAI IRALLAQGFQ NIVGTIHNAA PDFGGRVRLE MLDLLDQAAV
RDFFKVERPD HVFLAAAKVG GIHANNTYPA SFIHDNLVIQ SNVIHSAYES GVDRLLFLGS
SCIYPKLAPQ PMREEHLLTG PLEPTNEPYA LAKIAGIKMC ESYNRQYGTK FVAVMPTNLY
GPGDNFHPVN SHVLPALIRR FHEAKESGVE EVVVWGTGNA RREFLHVDDM AQACLFVLNL
EDAVFERELL SYPNPCFVNV GCGVDVSILE LAETVARIVG YDGKLFFDAE KPEGTPKKLL
DASRLTGLGW KAEIGLEEGV GGAYRWFLEN EGTRQ
|
|---|
| |