Gene Dbac_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2557 
Symbol 
ID8378236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2916826 
End bp2917383 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID645001778 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003159050 
Protein GI256830322 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCA AGCCGCTTTC GATCCCTGAG GTCATCTTGT TGACCCCCCG TGTCTTCGGT 
GATGACCGGG GCTTTTTTTA CGAAAGCTTC AATGCTCAAG CTTTCACAAA GGCAACTGGC 
GTTGCCACAG TTTTTGTGCA GGACAATCAT TCGTGTTCTC AGCGGGGTGT GTTGAGGGGC 
CTTCATTACC AACTTCCTCC GTATGCGCAG GGCAAACTCG TCCGTGTCGT GCATGGTGAG 
GTCTTTGATG TTGCCGTAGA CATCAGGAGA TATTCATCGA CTTTCGGGAA GTGGGTAGGG 
ACGTTGCTGT CGGCTGAGAA CAAGCGTCAA TTATGGATCC CGCCAGGATT CGCCCACGGA 
TTCATCACGT TGAGTGATCG CGCTGAGTTT CTTTACAAAA CAACAGCCTA CTATGCACCT 
GTAGCGGAAC GTTGCATTAG ATGGAACGAT TTGGATATTG GCATTGATTG GCCATATTCG 
GAAGCACCCT TCCTTTCAAA GAAAGACAAG CTTGGAACGT CGCTTGTTTT AGCTGAAGGC 
TTTGAAAGTG AATTTTAG
 
Protein sequence
MNAKPLSIPE VILLTPRVFG DDRGFFYESF NAQAFTKATG VATVFVQDNH SCSQRGVLRG 
LHYQLPPYAQ GKLVRVVHGE VFDVAVDIRR YSSTFGKWVG TLLSAENKRQ LWIPPGFAHG 
FITLSDRAEF LYKTTAYYAP VAERCIRWND LDIGIDWPYS EAPFLSKKDK LGTSLVLAEG 
FESEF