Gene Dbac_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2554 
Symbol 
ID8378233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2910644 
End bp2911738 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID645001775 
Productlipopolysaccharide biosynthesis protein-like protein 
Protein accessionYP_003159047 
Protein GI256830319 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3754] Lipopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCGA TAAAAATCAT CGCTTTTAAT CTGCCTCAGT ATCATCCAAT CCCAGAGAAT 
GATGAGTGGT GGGGTGCTGG GTTCACAGAA TGGCGCAACG TGGCCAAGGC GCGGCCACTT
TTCCCCGGAC ATAGGCAACC AAACTTGCCT GGAGAGCTCG GTTTTTACGA TATGCGTCTG
GATGATACTC TTGAGCGCCA GGGTGAACTG GCTGCATGGA GTGGTGTAAG TGCATTCTGC
TTCTATCACT ATTGGTTTGC TGGACGTCGC CTGCTTGAAC GTCCAATTGA GCGTTTGCGT
TCCATGACAT CGCCAAGCCT TCCGTACTGT CTGTGTTGGG CCAATCATCA CTGGACCAAC
CACTGGGCGG GAATTTCAAA TGATATCCTC GTGGAACAAA CCTATCCGGG CTTAGGGGAT
CATCGTGACC ACTATCTCTA TTGGCGGAAT TTCCTATCTG ATTCGCGATA TTTCAAGGTG
AACGGCAAGC CGGCTATGGT GATTTTCAGG CCCAATGATA TCCCTAAAGT GGCTCGTTTT
GTGGACTTAT TTCAGCAGTG GGCACGCGCA GATGGTTTTG GGGATCTATT TTTTATTGGA
TTAGATCATG ACTTGGGTCT GTTAGACGCA GGTTTTGACG CGGTGGCACC GCATAGTCTG
AATATAGCCT TGGCCGCCTA CCTCAAAGGG CATAGGCGAG CCTATCATTT AGTGCGGCAA
CGCCTCGGAC GGTTTCCGCG TTGGGTCATC GATTATTCTT CTCTCGACAG ATATTTCAAA
AATCATCTTT GCGATGGTAT TACAACGCTG CCGACCGCCA TTCCTAATTG GGATAATACG
CCTCGCATCG GTCGACGTGG CTTGGTGTTT GCTAATAGTT CCCCGGCCCG ATTTGCAGAT
CATCTACGAC GTAGTGTGTC AGGTTTTACG GCTGCTAATG ATGGCAAGGA TAGAATTCTT
TTTATTAAAT CGTGGAATGA GTGGGCTGAA GGAAACTATC TTGAACCTGA TTTGGTCCAT
GACAGAGGAT GGTTAGAGGC AGTGAGAAGT TTTGTGTCGC AATATAATGA TAAAAATTTT
TGTAAAGGTA GATAA
 
Protein sequence
MSSIKIIAFN LPQYHPIPEN DEWWGAGFTE WRNVAKARPL FPGHRQPNLP GELGFYDMRL 
DDTLERQGEL AAWSGVSAFC FYHYWFAGRR LLERPIERLR SMTSPSLPYC LCWANHHWTN
HWAGISNDIL VEQTYPGLGD HRDHYLYWRN FLSDSRYFKV NGKPAMVIFR PNDIPKVARF
VDLFQQWARA DGFGDLFFIG LDHDLGLLDA GFDAVAPHSL NIALAAYLKG HRRAYHLVRQ
RLGRFPRWVI DYSSLDRYFK NHLCDGITTL PTAIPNWDNT PRIGRRGLVF ANSSPARFAD
HLRRSVSGFT AANDGKDRIL FIKSWNEWAE GNYLEPDLVH DRGWLEAVRS FVSQYNDKNF
CKGR