Gene Dbac_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2548 
Symbol 
ID8378227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2903355 
End bp2904554 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content33% 
IMG OID645001769 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003159041 
Protein GI256830313 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTC CAATTCTTTG CCCATCAGAC TATTGTACTG GATGCGAGGC TTGCAGAAAT 
ATTTGTCCGG AACAATGTAT AACTATGGTT GCTGATTACG CAGGGTTTTT AAGGCCTGTC
ATTGATGCGG ATAGATGTGT TGGTTGTTTG CTTTGTGAAA AAAGTTGCCC TGTTTTACTT
AAACCCAAAT TGGATAATTT AAGCGATCCG CACACTTTTG CCTGTTGGCA CAAAAATGAT
GAAGTCCGAG CCAGAAGTTC TTCTGGAGGT GCCTTTTCTG CACTAGCTAA ATATGTGCTA
AATGAAGATG GTTTTGTTTT TGGCGCTGCA TATGACGAAA ATTTATATGT TCGTCATATT
TGTATTGAAA AAATCAATGA TTTAGATTTG TTGCGTCGAT CTAAATATGT TCAAAGTGAG
ATAGGAAGTT CGTTTCGGCA AGTCAAAGAC TATTTAAAAT CTAAACGTTT TGTTTTATTT
GTTGGCGCTC CATGTCAAAT TGCGGGGTTA ATTTCTTTTT TGGGAAAAAA ATATGATAAT
CTTTTAACTA TTGACTTCGT ATGTCATGGT GTTCCGTCAC CTTTGGTGTT AAGTTCATAC
ATAAAATTTA TATCAAATAA ATATAAAACA ATTTTTATTG ATTTAAACTT TCGTGACAAG
AGAAATGGTT GGGAAAATAA CGCAGTCATT GCTACTAATG AATACAAAAA AGAATATCAT
TTAAAAGGTA GTGCAAATTC ATATTTTAAT GGATTTATTT CAAATACTTT TTTAAGAGAT
TCGTGTTATC AATGTCCATT TATTGGAATG CCTCGTTATG GAGATATCAC TTTAGGTGAT
TTTTGGGGTA TACAACGAGA TAAGACAATC TCTCAAAATG AAATTGATAA GGGTATATCT
CTCTTGCTCT TAAATAATGA GAGCGTTTAC GGTAAGATTA GATTTCCTCT TGAAGATCTT
GTTTCTTTCG AAAAAGATTT TAAGGATGCA TCTGCAGGAA ATAGTCCTGT TTTTACTCCT
GCATTTCTTC CAGAAACTAG GGGTAATTTT TTTGAAGAAT TAAAATTCAA AAATTATGAT
GAGGTAGCTT CTAAATATTT GAACCCACCT TTGAAACGGC GACTGACCCA ATTTATTAAA
GATAATTTTG GGTCGATAAT TATTTCTAAA TTAAGAAAGG CAAAGAGTAT TATAAAATAA
 
Protein sequence
MSTPILCPSD YCTGCEACRN ICPEQCITMV ADYAGFLRPV IDADRCVGCL LCEKSCPVLL 
KPKLDNLSDP HTFACWHKND EVRARSSSGG AFSALAKYVL NEDGFVFGAA YDENLYVRHI
CIEKINDLDL LRRSKYVQSE IGSSFRQVKD YLKSKRFVLF VGAPCQIAGL ISFLGKKYDN
LLTIDFVCHG VPSPLVLSSY IKFISNKYKT IFIDLNFRDK RNGWENNAVI ATNEYKKEYH
LKGSANSYFN GFISNTFLRD SCYQCPFIGM PRYGDITLGD FWGIQRDKTI SQNEIDKGIS
LLLLNNESVY GKIRFPLEDL VSFEKDFKDA SAGNSPVFTP AFLPETRGNF FEELKFKNYD
EVASKYLNPP LKRRLTQFIK DNFGSIIISK LRKAKSIIK