Gene Dbac_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2500 
Symbol 
ID8378178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2866228 
End bp2867451 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content59% 
IMG OID645001722 
Productinner-membrane translocator 
Protein accessionYP_003158995 
Protein GI256830267 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.62609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGT TGAAAAAATC CATCCTGGTC AGCCTGTGGT TCATGTTTCT GACCTTTCCC 
ATCATGGTCA TTCGCGTCAA CACCATCGAA AAGACGGTGC TGTGGCGCTG GGAGAACATG
GCCTGGATCG GGATCGGCAG TTTTGTGCTG TCCTTTGTGT GGCGCTGGGC CATACGGCGC
AAGGAAGCGG GAGACGCGGT GGCGGCTTCC GGAGAAAAGA AGACCGGGAA ACTGGCGGAG
ATGGCCAATA ACCCCGCCCT GACCAATACG TTCCGGGCGC TGTTTCTGGT CATTTTTTTG
GTTACGCCCT GGCTGGTGAC CACCTATCAG ACCAACATTC TCATCTCTTT TCTGCTTTAC
GTGGTGCTCG GGCTTGGGCT GAACATCATT GTCGGCGTGG CCGGACTTCT TTTTCTCGGG
CATGCCGCCT TTTACGCCAT CGGTGCGTAT TCCTACGCGC TCCTGAACCA GTATTTCGGT
CTTGGTTTCT GGGTCGCGCT GCCGCTCGGC GGCGTGATCG CGGCCCTGGC CGGCATCGCC
CTGGCCTTTC CCGTGCTCCG GCTGCGCGGG GACTATCTGG CCATCGTCAC CCTCGGGTTT
GGCGAGATCG TGCGACTGGT GCTGGAAAAC TGGAGCGATC TGACGGGTGG CCCGTCGGGC
ATCTCGAATA TCCCGCGTCC GGGCCTTTTC GATGCCACGC TCTCCGTTGC GGATGCGAAT
ATCTACATCT ATTACATTGT GCTGGCGCTG GCCATCATCA CCATCATCGC CGTGACCCGC
CTCAAGGATT CGCGCATCGG CCGCGCCCTG CAGGCCCTGC GTGAAGACGA GATCGCGTGC
GAGGCGATGG GCATCGACCG CGTCGGCGTG AAGGTCATGG CTTTTGGACT GGGCACGGCC
TGGGCCGGGT TCGCCGGAGT CATTTTCGCT GCCAAGACCA CCTTCATCAA CCCGGCCAGC
TTCACCTTTT TCGAATCGGC CATCATTTTG TCCATTGTCG TTCTGGGCGG GATGGGATCA
AATCTCGGGG TCATTCTCGG CTCCGCCTTT CTGGTGCTTT TGCCCGAATA TCTGCGCGCC
TTCTCCGAGT ACCGCATGAT CCTTTTCGCC ACGGCCATGG TGCTGATGAT GGTCTTTAGG
CCCCAGGGGC TCATTCCGGC CAAGGGGCGG TCCTACACCG TGGACGATCC TGAACTGAAC
GCGGCCGATG GAGGACGTAT CTAG
 
Protein sequence
MNELKKSILV SLWFMFLTFP IMVIRVNTIE KTVLWRWENM AWIGIGSFVL SFVWRWAIRR 
KEAGDAVAAS GEKKTGKLAE MANNPALTNT FRALFLVIFL VTPWLVTTYQ TNILISFLLY
VVLGLGLNII VGVAGLLFLG HAAFYAIGAY SYALLNQYFG LGFWVALPLG GVIAALAGIA
LAFPVLRLRG DYLAIVTLGF GEIVRLVLEN WSDLTGGPSG ISNIPRPGLF DATLSVADAN
IYIYYIVLAL AIITIIAVTR LKDSRIGRAL QALREDEIAC EAMGIDRVGV KVMAFGLGTA
WAGFAGVIFA AKTTFINPAS FTFFESAIIL SIVVLGGMGS NLGVILGSAF LVLLPEYLRA
FSEYRMILFA TAMVLMMVFR PQGLIPAKGR SYTVDDPELN AADGGRI