Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2500 |
Symbol | |
ID | 8378178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2866228 |
End bp | 2867451 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645001722 |
Product | inner-membrane translocator |
Protein accession | YP_003158995 |
Protein GI | 256830267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.62609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGAGT TGAAAAAATC CATCCTGGTC AGCCTGTGGT TCATGTTTCT GACCTTTCCC ATCATGGTCA TTCGCGTCAA CACCATCGAA AAGACGGTGC TGTGGCGCTG GGAGAACATG GCCTGGATCG GGATCGGCAG TTTTGTGCTG TCCTTTGTGT GGCGCTGGGC CATACGGCGC AAGGAAGCGG GAGACGCGGT GGCGGCTTCC GGAGAAAAGA AGACCGGGAA ACTGGCGGAG ATGGCCAATA ACCCCGCCCT GACCAATACG TTCCGGGCGC TGTTTCTGGT CATTTTTTTG GTTACGCCCT GGCTGGTGAC CACCTATCAG ACCAACATTC TCATCTCTTT TCTGCTTTAC GTGGTGCTCG GGCTTGGGCT GAACATCATT GTCGGCGTGG CCGGACTTCT TTTTCTCGGG CATGCCGCCT TTTACGCCAT CGGTGCGTAT TCCTACGCGC TCCTGAACCA GTATTTCGGT CTTGGTTTCT GGGTCGCGCT GCCGCTCGGC GGCGTGATCG CGGCCCTGGC CGGCATCGCC CTGGCCTTTC CCGTGCTCCG GCTGCGCGGG GACTATCTGG CCATCGTCAC CCTCGGGTTT GGCGAGATCG TGCGACTGGT GCTGGAAAAC TGGAGCGATC TGACGGGTGG CCCGTCGGGC ATCTCGAATA TCCCGCGTCC GGGCCTTTTC GATGCCACGC TCTCCGTTGC GGATGCGAAT ATCTACATCT ATTACATTGT GCTGGCGCTG GCCATCATCA CCATCATCGC CGTGACCCGC CTCAAGGATT CGCGCATCGG CCGCGCCCTG CAGGCCCTGC GTGAAGACGA GATCGCGTGC GAGGCGATGG GCATCGACCG CGTCGGCGTG AAGGTCATGG CTTTTGGACT GGGCACGGCC TGGGCCGGGT TCGCCGGAGT CATTTTCGCT GCCAAGACCA CCTTCATCAA CCCGGCCAGC TTCACCTTTT TCGAATCGGC CATCATTTTG TCCATTGTCG TTCTGGGCGG GATGGGATCA AATCTCGGGG TCATTCTCGG CTCCGCCTTT CTGGTGCTTT TGCCCGAATA TCTGCGCGCC TTCTCCGAGT ACCGCATGAT CCTTTTCGCC ACGGCCATGG TGCTGATGAT GGTCTTTAGG CCCCAGGGGC TCATTCCGGC CAAGGGGCGG TCCTACACCG TGGACGATCC TGAACTGAAC GCGGCCGATG GAGGACGTAT CTAG
|
Protein sequence | MNELKKSILV SLWFMFLTFP IMVIRVNTIE KTVLWRWENM AWIGIGSFVL SFVWRWAIRR KEAGDAVAAS GEKKTGKLAE MANNPALTNT FRALFLVIFL VTPWLVTTYQ TNILISFLLY VVLGLGLNII VGVAGLLFLG HAAFYAIGAY SYALLNQYFG LGFWVALPLG GVIAALAGIA LAFPVLRLRG DYLAIVTLGF GEIVRLVLEN WSDLTGGPSG ISNIPRPGLF DATLSVADAN IYIYYIVLAL AIITIIAVTR LKDSRIGRAL QALREDEIAC EAMGIDRVGV KVMAFGLGTA WAGFAGVIFA AKTTFINPAS FTFFESAIIL SIVVLGGMGS NLGVILGSAF LVLLPEYLRA FSEYRMILFA TAMVLMMVFR PQGLIPAKGR SYTVDDPELN AADGGRI
|
| |