| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2457 |
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| Symbol | |
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| ID | 8378135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2822261 |
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| End bp | 2824027 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645001679 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003158952 |
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| Protein GI | 256830224 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.36607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA TCAAGGATGT TCAGCAAATT CAGGCGCTGA TTGCCGAAGG GAAGAAAAAG
GGTTTTCTGA CCTTCGATGA ACTCAACAAG GCCCTGCCTT CCGAAGTAAA CACTCCGGAA
CAGATAGAAG AAATCATTGT CATTTTCGAT CAGCTGGACA TTGATATCGT CGACGAGAAG
CTCTCTCGCG GGATCGAGAT CGCCGAGGAC GATGGCGAGG AGCCCAAGGA AGAGGAAAAG
CTCGAACTGG CCGAAGACGA GGACGGCGCG GATTATTCCT CGCGCAGCAA CGACCCCGTG
CGCATGTATC TGCGTGAGAT GGGCGCCGTG GGCCTTTTGG ACCGCGACGG CGAAGTCTAC
ATCGCCAAGA AGATCGAAGC CGGCGAGCTT GAGGTCATGT ACGCCCTGGT CGAAGTGCCC
GTGGCCGTCG AGGAACTTGT GCGTGTCGGC GAGGACCTCA AAAAGGGCCG CATGAAGCTC
AAAGACGTGG TCAAGACCAT CGAGGAGGAC GATCCGTCCG AAGAGGAGAT GAACCAGCGC
GAGCGGGTCA TCAAGCTGCT GGAGGATGTG AAGAACATCT ACCGCAAGAA GAAGCCCCTC
TACACCCGTC TCGACGAGTG CGCGACTCTC GATAAGCGCG TTTTCGGCGT GCAGAAGAAG
ATCATGGACT ACAAGGAAGG CGTTGTGCAG TGCCTGCGCG ACATCAAGCT TGAAAAGACG
CTCATCGACC GCATCATCGA GACCGTCGGC GATTACGTGC GCCAGATGCA CAATTGCCGC
CGCGACCTTT CGGCCTATAT CCTGTCTCTG GGCAAATCCC AGGATGAGAT CTTCGGCATT
TTCAAGCAGC TCGAAGAGCG CACCATCAAT CCCGTGGCCG CCGCCGATCA GCTCGGCATG
ACCATGGAAG AGCTTTTTTC CTTCAAGGAA ATGGTCAACG GCAAGATCGA GATCCTCGGC
AAGCTGCAGG AAAACGCCAT GCATGACGTG GATCAGCTCG AAGAGATCCT GTGGCGCATC
CGCAAGGGCA ACACCGACGC CCTTGACGCC AAGCAGGAAC TCATTCGCGC CAATCTGCGC
CTGGTCGTGT CCATCGCCAA GAAATACACC AACCGCGGCC TGCAGTTCCT GGACCTCATC
CAGGAAGGCA ACATCGGCCT CATGAAGGCT GTGGACAAAT TCGAATATCA GCGCGGCTAC
AAGTTCTCGA CCTACGCCAC ATGGTGGATC CGTCAGGCCA TCACCCGCGC CATCGCCGAT
CAGGCCCGCA CCATCCGTAT TCCGGTGCAC ATGATCGAGA CCATCAACAA GCTGGTGCGC
ACCTCCCGCT ACCTGGTCCA GGAGCTGGGC CGCGACCCCT CCCCGGAGGA GATCGCCGAG
CGCATGGACT ATCCGCTGGA GAAGGTCAAA AAGGTGCTCA AGATCGCCAA GGAGCCCATT
TCCCTGGAAA CCCCCATCGG TGACGAAGAA GATTCGAGCC TGGGCGATTT CATCGAGGAC
AAGAAGGCCG TGGCTCCTGC CGACGAAGTG GTCAACACCA AGTTGGCCGA GCAGATCGCC
CAGGTGCTCT CCGACCTCAC CCCGCGCGAG GAACAAGTCC TGCGCAAGCG CTTCGGCATC
GGCGAGAAGA GCGACCACAC CCTTGAGGAA GTGGGCAAGC TCTTCAACGT CACCCGCGAG
CGTATCCGCC AGATCGAGGC CAAGGCCCTG CGCAAGCTGC GCCACCCCGT GCGCAGTCAG
CAGCTGCGTT CCTACTATGA GTCCTAG
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| Protein sequence | MSNIKDVQQI QALIAEGKKK GFLTFDELNK ALPSEVNTPE QIEEIIVIFD QLDIDIVDEK
LSRGIEIAED DGEEPKEEEK LELAEDEDGA DYSSRSNDPV RMYLREMGAV GLLDRDGEVY
IAKKIEAGEL EVMYALVEVP VAVEELVRVG EDLKKGRMKL KDVVKTIEED DPSEEEMNQR
ERVIKLLEDV KNIYRKKKPL YTRLDECATL DKRVFGVQKK IMDYKEGVVQ CLRDIKLEKT
LIDRIIETVG DYVRQMHNCR RDLSAYILSL GKSQDEIFGI FKQLEERTIN PVAAADQLGM
TMEELFSFKE MVNGKIEILG KLQENAMHDV DQLEEILWRI RKGNTDALDA KQELIRANLR
LVVSIAKKYT NRGLQFLDLI QEGNIGLMKA VDKFEYQRGY KFSTYATWWI RQAITRAIAD
QARTIRIPVH MIETINKLVR TSRYLVQELG RDPSPEEIAE RMDYPLEKVK KVLKIAKEPI
SLETPIGDEE DSSLGDFIED KKAVAPADEV VNTKLAEQIA QVLSDLTPRE EQVLRKRFGI
GEKSDHTLEE VGKLFNVTRE RIRQIEAKAL RKLRHPVRSQ QLRSYYES
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