| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2450 |
|---|
| Symbol | |
|---|
| ID | 8378128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2813725 |
|---|
| End bp | 2816388 |
|---|
| Gene Length | 2664 bp |
|---|
| Protein Length | 887 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645001672 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_003158945 |
|---|
| Protein GI | 256830217 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.970931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACG AGACGCTTTC CAAGGGATAC GAACCAGCCG ACGTGGAAGA ACGGTGGCTT
GAGTACTGGA AGACGCACCA GAGCTTCACC CCCGACGCGT TCAAGGCCGC GTCGACGCCC
ACGGACAACT ACTCCATCGT CATCCCGCCG CCCAACGTCA CGGGGGCTCT GCACATGGGG
CATGCCTTGA ACCTCACTCT GCAGGACATC ATGTGCCGGT ACATGCGCCA GCGGGGCAAG
ACCGTGCTCT GGGTGCCGGG CACGGACCAT GCGGGCATCG CCACCCAGAA CGTGGTGGAA
AGGAAGCTCC TGGCCGAAGG CACGAAGCGC GAGGACCTGG GCCGCGAGGA ATTCATAAGC
CGCGTCTGGG AATGGAAGGA AGACTACGGC GGACGCATCC TGAACCAGAT CCGTCGCATG
GGCGCGAGCG TGGACTGGAG CCGGGAGCGC TTCACCATGG ATGAGGGCTT GTCCAAAGCC
GTGCGCGAGG TTTTCGTCTC TCTCTACGAG CAGGGCCTTG TCTACCGCGG CAAGTACATC
ATCAACTGGT GCACCCGCTG CCATACGGCC CTGGCCGATG ACGAGGTCGA ATACGCCCCG
GCCAAGTCCA CCCTTTATCA TCTGAGCTAT CCTCTCGAAG ACGGCTCCGG CTCCGTGACC
GTGGCCACGG TGCGGCCCGA GACCATGCTC GGCGACACGG CCGTGGCCGT GCATCCCGAG
GACGAGCGCT ACCAGTCCAT GATCGGCAAG CACGTCATCC TGCCGCTGGT GGGTCGCCGC
ATCCCGATCA TCGCCGACGC CTATGTGGAC CGCGAGTTCG GCACCGGCTG CCTCAAGATC
ACCCCGGCCC ACGACATGAA CGACTGGGAG ATGGGCCGCA AATACGGGCT CGAAGCCATC
AGCGTCATCG ACGACAAGGG CTGCATGAAC GACAATGCGC CTGAGGCGTA TCGCGGCATG
AGCGCCGCCG ACTGCCGCGC GCTCATCGCC CTGGACCTGC GTGCCTGCGG GTCTCTCACG
GCCGAGGAAC CTTACGAGAA CAAGGTCAAC CAGTGCTACC GCTGCAAGAC CAATATCGAG
CCCTTCGTGT CCGAGCAGTG GTTCGTGTCC GTCAAGCCGC TGGCCGAAAA GGCCAGGGCG
GCGGTGGAGG ACGGCCGCAC GACCATCTGG CCTGCGCAGT GGAACAAGAC CTATTTCAAC
TGGCTCGACA ACATCCGCGA CTGGTGCATC TCGCGCCAGC TGTGGTGGGG GCACCGCATT
CCGGTCTGGA CCTGCCAGGA CTGTGGCGAG CTGATCGTGG CCCGTGAGGA CCCGACCGCC
TGCGCCTGCG GCAGCACCCG CCTCCTGCAG GACGAGGACG TGCTCGACAC CTGGTTCTCC
TCCGCCCTGT GGCCGTTCTC GACCATGGGC TGGCCGGAGC AGACCAATGA GCTCAAGGCT
TTCTACCCGA CTTCCCTTCT GGTCACGGGT TTTGACATCC TCTTCTTCTG GGTGGCCCGC
ATGATGATGA TGGGCCTGCA GTTCATGGAC AACGTGCCCT TCAAGGACGT CTATATCCAC
GCCCTGGTCC GTGACGAGCA CGGCAAGAAG ATGTCCAAGT CCACGGGCAA CGTCATCGAC
CCCCTGGCCA TGATCGACAA GTACGGCTGC GACTCCCTGC GCTTCACCCT GACCTCGTTC
GCGGCCATGG GCCGGGACAT CAAGCTCTCC GAGGCGCGCA TCGAGGGCTA TCGCCATTTC
ATCAACAAGA TCTGGAACGC GGCTCGCTTC GCCCTCATGC ATGTCGATGG GACGGAGCCG
GAATTCGATC CCAAGGCGCT GTCCGGACTG CACCACACCT GGATCCTGCA CCGTCTGGAG
ACGCTCAAGA AAGAGCACTC CGCCCAGATC GAGGGCTACC GCTTCAACGA GGCCGCCCAA
GGCCTGTACG GATTCGTCTG GCGCGAGTTC TGTGACTGGT ACCTCGAACT GATCAAGCCC
GAGCTCTACG GCGAGGACGA GGCGGCCAAG GCGGCGGCAC GATCCTGCCT CAAGCACGTG
CTGTCCGAGA TCATGATCAT CGCCCATCCG GTCATTCCCT TCGTGACGCA GGAGATCTGG
TCCTGCATCC CGACCCTCGA CGTCGAGAGC CTGGCCCTGC GGCCTTTCCC CAAGGTCCGC
CCCGAATGCG AGAACGAGGG TGCCGTCAGG GACATGGAGT TTCTGCAGGG CGTCATCGTG
GCCGTGCGCA ACATCCGCTC CGAACTGGGC GTGGCTCCGG GTGTCCCGCT TGCGGTGCTG
ATGCGGGCCG GGAGTGACGA TCAGGCCTTC CTGATGGCCC ATGAAACGGA AATAGCGGCG
CTGGCCCGGG TCGGGACGCT GACCGTGGGC GCCGACATCG AAGCGCCCAA GGGATGCGCC
TCGGCGGTGG TCCGTGGCTG CGAGCTCTAC GTGCCGCTCG AAGGGGTGGT GGATTTTGTG
GCCGAATTGG CCCGCCTCGA CAAGGAACTG GGCAAGATCT CGAAAGAACT CGACTTCGTG
ACCAAGAAAC TCGGCAACGA GAGTTTTGTA AGCAAAGCCC CCGAGGACGT GGTGGCCAAG
GAAAAGGCCA AGGCGGCGGA TTTCGCAGAG AAAAAGGCCA CCTTGGAGCA GCTGCGGGCC
AAGGTGCAGG ATTTCATCAA GTAG
|
|---|
| Protein sequence | MANETLSKGY EPADVEERWL EYWKTHQSFT PDAFKAASTP TDNYSIVIPP PNVTGALHMG
HALNLTLQDI MCRYMRQRGK TVLWVPGTDH AGIATQNVVE RKLLAEGTKR EDLGREEFIS
RVWEWKEDYG GRILNQIRRM GASVDWSRER FTMDEGLSKA VREVFVSLYE QGLVYRGKYI
INWCTRCHTA LADDEVEYAP AKSTLYHLSY PLEDGSGSVT VATVRPETML GDTAVAVHPE
DERYQSMIGK HVILPLVGRR IPIIADAYVD REFGTGCLKI TPAHDMNDWE MGRKYGLEAI
SVIDDKGCMN DNAPEAYRGM SAADCRALIA LDLRACGSLT AEEPYENKVN QCYRCKTNIE
PFVSEQWFVS VKPLAEKARA AVEDGRTTIW PAQWNKTYFN WLDNIRDWCI SRQLWWGHRI
PVWTCQDCGE LIVAREDPTA CACGSTRLLQ DEDVLDTWFS SALWPFSTMG WPEQTNELKA
FYPTSLLVTG FDILFFWVAR MMMMGLQFMD NVPFKDVYIH ALVRDEHGKK MSKSTGNVID
PLAMIDKYGC DSLRFTLTSF AAMGRDIKLS EARIEGYRHF INKIWNAARF ALMHVDGTEP
EFDPKALSGL HHTWILHRLE TLKKEHSAQI EGYRFNEAAQ GLYGFVWREF CDWYLELIKP
ELYGEDEAAK AAARSCLKHV LSEIMIIAHP VIPFVTQEIW SCIPTLDVES LALRPFPKVR
PECENEGAVR DMEFLQGVIV AVRNIRSELG VAPGVPLAVL MRAGSDDQAF LMAHETEIAA
LARVGTLTVG ADIEAPKGCA SAVVRGCELY VPLEGVVDFV AELARLDKEL GKISKELDFV
TKKLGNESFV SKAPEDVVAK EKAKAADFAE KKATLEQLRA KVQDFIK
|
|---|
| |