| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2420 |
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| Symbol | |
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| ID | 8378098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2775095 |
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| End bp | 2777305 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645001642 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003158915 |
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| Protein GI | 256830187 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTT TTCAGACCAC CAGACGCACC ATCCCCATGG GCGACAGTGA AATCATCATC
GAACACGGCA AGCTCGCGCT GCAGGCCAGC GGTGCCGTAA CCGTGCAGTG GGGCGACACC
GTCGTTCTGG TCACGGCCAC CCATCAGGCC CTGGACCGGG TCGTGGATTT TCTTCCCCTG
ACCTGCAACT ATCAGGAAAT GCTCTATTCC GCCGGTCGCG TCCCGGGCAA CTATTTTCGC
CGCGAAGTGG GCCGCCCCAG CGAGCACGAG ACCCTGACCT CCCGGCTCAT GGACCGCCCC
ATCCGTCCGC TCTTTCCCAA GGGCTGCACC AATGAGATCC AGGTCATCGC CACGGTCATC
TCCTCGGACA AGGAGCGCTC CGCCGACATC CTGGCCATGC TGGGCGCATC CACGGCCCTG
CACATCTCCG AGATCCCCTT CGCCGGTCCC ATTGCGGCCA TCCGCGTGGG CTATCGTGAC
GGAAAATTTC TCCTCAATCC CACGGCCACG GAGCTTGCCA CAAGCCAGCT GAACATGATC
CTGGCCGGTT CGCGCGACGC GGTGGTCATG GTCGAAGGCG GAGCCCAGTT CCTGTCCGAG
GACATCATGA CCGAGGCCGT AGCCTGGGGA CACGCCCAGC TCGGGCCCCT GCTCGATGCC
CAGGAAGAGC TGCGCAAGGA GCTTGGCAGA GAGAAATTCA CGGTCACTCC CCCGACCGAA
GACACGGAAC TGATTGAAGC CGTGGCCGGA CTTGCCACCG CTCCTCTGAC CGAAGCCCTG
GCAGTGCCCG GCAAGATGGA TCGCCGCGAT GCCAAGAAAA AGGTCAAGCA GAATCTGATG
GAAGCCCTGA TGGCGAAATA CGCCGAGACT CCCGAACGAA TCAGGGGCGT TGGCGAGATC
ATGGAAAAGC TGGAGAAGAA GATCGTCCGC CAGCGTATCA TGACCGACAA GATCCGCATC
GACGGCCGCG ATCTGACCAC GGTCCGTCCC CTGATCATGG AAGTGGGTTT TCTGCCTCGC
ACCCATGGCT CGGCCATCTT CACGCGCGGC GAGACCAAGG CCCTGTGCAC ATGCACCCTC
GGCAGCACCC GCGACGAGCA GCGCATCGAG ACCCTGGCCG GCGATACATC CAGGCGCTTC
CTGATGCACT ACAACTTCCC GCCGTACAGC GTGGGTGAAG CCCGCATGCT GCGCGCCCCC
GGACGCCGCG AAATCGGCCA TGGCGCCCTG TCGGAGCGAG CCCTGAATCC TGTTCTGCCC
GAGCCGGACG CGTTCCCGTT CACCATCCGT GTCGTCTCCG ACATCATGGA ATCCAACGGT
TCCTCCTCCA TGGCCTCCGT CTGCGGCGGC ACCCTTGCGC TCATGGACGC GGGCGTGCCC
ATCAAGACCC CCATCGCGGG CATCGCCATG GGCCTGATCA AGGAAGGCGA CGAATACCTC
GTCCTGACCG ACATCCTCGG TGACGAAGAC CACTTGGGCG ACATGGACTT CAAGGTCGCG
GGCAGCCGCG ACGGCGTGAC CTCCATCCAG ATGGACATCA AGATTGCGGG CATCCCGGCC
GAAGTCATGC AGAAAGCCCT GCACCAGGCC AAGGACGCCC GCGTGCACAT CCTCGATCAG
ATGGAGGCGC TTATCGCCGC CCCCAGAGGC GAGCTGTCCA AGTTTGCTCC GCAGATGGAC
ATCGTGCACA TTTCGCAGGA CAAGATCCGC GAAGTCATCG GACCCGGCGG CAAGAACATC
AAAGCCATCT GCGAAGCAAC CAAGGCCGAC ATCGACATCG ACGATTCGGG CAAGATCTCC
ATCTTCGCCC CGGATTCCGT CTCCTTGGCC AAGGCCCGGG AAATGGTGCT CTACTACGAC
CAGAAGGCCG AACTGAACAA GGACTATGAC GGCATCGTCA AAAAGATCAT GGACTTCGGC
GCGTTCATCG AGATCCTGCC CGGGCTTGAA GGCCTGTGCC ACATCTCGCA GCTGGCCCGT
GACCGCGTCA ACGTGGTGAC GGATGTGGTC CAGGAAGGCG ACGCCATCCG CGTCCGTGTC
ATCGACATCG AACCTTCCGG ACGCATCAAG CTCAGCCGCA AGGCCATCAT CCTCGAAGAA
CTGGGCGAAG AGCCCGAGCC GGTTCAGCCC CGCTCCGACC GCCCGCGCAG CGACAGACCG
CGCGGCGGGG ACAGACCGCG CGGCGGCGAT CGCGGCGGAC CACGCCGCTA A
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| Protein sequence | MAAFQTTRRT IPMGDSEIII EHGKLALQAS GAVTVQWGDT VVLVTATHQA LDRVVDFLPL
TCNYQEMLYS AGRVPGNYFR REVGRPSEHE TLTSRLMDRP IRPLFPKGCT NEIQVIATVI
SSDKERSADI LAMLGASTAL HISEIPFAGP IAAIRVGYRD GKFLLNPTAT ELATSQLNMI
LAGSRDAVVM VEGGAQFLSE DIMTEAVAWG HAQLGPLLDA QEELRKELGR EKFTVTPPTE
DTELIEAVAG LATAPLTEAL AVPGKMDRRD AKKKVKQNLM EALMAKYAET PERIRGVGEI
MEKLEKKIVR QRIMTDKIRI DGRDLTTVRP LIMEVGFLPR THGSAIFTRG ETKALCTCTL
GSTRDEQRIE TLAGDTSRRF LMHYNFPPYS VGEARMLRAP GRREIGHGAL SERALNPVLP
EPDAFPFTIR VVSDIMESNG SSSMASVCGG TLALMDAGVP IKTPIAGIAM GLIKEGDEYL
VLTDILGDED HLGDMDFKVA GSRDGVTSIQ MDIKIAGIPA EVMQKALHQA KDARVHILDQ
MEALIAAPRG ELSKFAPQMD IVHISQDKIR EVIGPGGKNI KAICEATKAD IDIDDSGKIS
IFAPDSVSLA KAREMVLYYD QKAELNKDYD GIVKKIMDFG AFIEILPGLE GLCHISQLAR
DRVNVVTDVV QEGDAIRVRV IDIEPSGRIK LSRKAIILEE LGEEPEPVQP RSDRPRSDRP
RGGDRPRGGD RGGPRR
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