Gene Dbac_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2402 
Symbol 
ID8378079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2757106 
End bp2758890 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content61% 
IMG OID645001623 
Productflagellar hook-associated protein 3 
Protein accessionYP_003158897 
Protein GI256830169 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTAT CCCTTCGTAA TCAGTACAGC AATTTTCTGT ACAATCTGCA GGACACCCAG 
TCCCGGCTCA TGGATCTGAA CATGCAGGCT TCCAGCCAGA AGCGCATCAA CAAACCCTCA
GACGATCCGG TGGGTACGGC CCGCGTGCTC AATTACCGCA CCTCCCTGTC CTCCATCGAC
CAGTACCGCA GCAACATCGA TACGGCCAAG GGCTGGCTTG GCCTGGCCGA CGAATCCATG
ATCCAGGTCA GCACCTTGCT CACCAAGCTC AAGGGACTGG CCGAGCAGGG CGCTTCCGGG
ACAATGACCG CCTCCGACCG CGAGGCGACC TCCTACGAGG TCCGCCAGAT ATTCAGCCAA
CTGGTCAACC TGGCCAACTC CCGGTTCGAG GGGAACGCCA TTTTCGGAGG CCAGAAATTT
GACGAGAGCG CCTTCGAGGA GGCGCTCATG GTCTACGATC AGGACGGCAA CAGCCTCGGC
CTGGCCACGG GCCTGGCCAG CCGCAGTTTC GTCGTCCAGT TCCTGGGGGC GGAAGGGACC
ACCGTTCCAG TCAGCGGCAC GGACTGCCGG TTCAGCAAGG ACGGGGGCGC AACCTGGGAG
ACAGGAACCT GGGACGCCGA CGGATCGCTG AATCTGGGCG GAGTCAGCGT TTCTTTTCCG
GCTGATTATG AAGTGGAGCT TTCGCCCGAG TCCAACAAGC TGATGACAAA GGGCTCGTGG
CTGACCGTGG CCCCCACGGC GGTCTACAAG GGCGATCACG AATCTCAGTC CGCAGTCCTG
TATTCCGCTG GGAGCGCGAC CATCTCCGCC TTGCCTCTGG GAGGTTTCGA GAAGGACGTG
GAAGTCCGGG TTTTGGGCGC GGTCGGAGCC CCCGGCAGCG GCGGCACGTT TCAGGCCGAG
TACTCAGTTG ACGGGACCAC CTGGACGACC GTCACGGTAG ACAACATTGC CACGCCCGTC
ATTCAGACGC CGTATGGCGG GGTGCAGGTG ACCGGCAGCG GCAATCTCAC GGGCGTGGAG
TTCATGGTCA AATCCGGGTC CACCGGGGTC ATTCAGATGG GCGCTGCGGT CAACGCCGAG
GGGCGCGGAC TTTTTTCAAG CGATGTCATG GCGCGCATTG ATAACGATGC TCCGGTGAAT
ATCGGTTCAG GGGTACCCAT CGAATACTCT TACAGTACCG ACGGCGGCGT GAACTGGTCC
ACAGGGCATA CGGCCGCCAA CACCGGCACC GCTGCCGACC TGCTGGTGCC GGGCGGAAAG
TTGGTGCTTT CGGGCCGGGA TGGCGTGGTC CAGCTTGTCA AGAATGCCCA GTTCGTCATC
CATCCTCAGA CGGCGGCGCA CAACGTGGAG ATTTCCGCCG GGCAGTATCT GCAGCTCAAC
AACGTCGGCG CGGAAATTTT CGGTGGTTAC TATGAAAACG GAACGCAGCC GGTGTTCTCT
GATTCCGATG TGGGCAACAA CATCATGGTG ACCGTGGGCA AGCTGGTGGC CGCGCTTGAA
AACAACGATC AGCAAGGCTG CGCCGAGGCC CTGGACGGGC TGAAGACGGG CCATCAGTAT
TTCACAACCC AGCTGGCCTC CGTGGGCGCG CGGGAAAACC GGCTCGATGT GGCCGACACC
GTTCTTTCCG GCCTCAAACT CAACGAAACC GAGCGCATGA GCAATGTGGA GGATGCGGAT
CTGGCCACGC TTCTGACGGA GCTGGCCAAC CAGCAGCTGT CTTATGAAGC GGTCCTCAAA
TCCTCGTCCA TGATCATGAA GATGAGCCTG GTCAATTATC TGTAG
 
Protein sequence
MRVSLRNQYS NFLYNLQDTQ SRLMDLNMQA SSQKRINKPS DDPVGTARVL NYRTSLSSID 
QYRSNIDTAK GWLGLADESM IQVSTLLTKL KGLAEQGASG TMTASDREAT SYEVRQIFSQ
LVNLANSRFE GNAIFGGQKF DESAFEEALM VYDQDGNSLG LATGLASRSF VVQFLGAEGT
TVPVSGTDCR FSKDGGATWE TGTWDADGSL NLGGVSVSFP ADYEVELSPE SNKLMTKGSW
LTVAPTAVYK GDHESQSAVL YSAGSATISA LPLGGFEKDV EVRVLGAVGA PGSGGTFQAE
YSVDGTTWTT VTVDNIATPV IQTPYGGVQV TGSGNLTGVE FMVKSGSTGV IQMGAAVNAE
GRGLFSSDVM ARIDNDAPVN IGSGVPIEYS YSTDGGVNWS TGHTAANTGT AADLLVPGGK
LVLSGRDGVV QLVKNAQFVI HPQTAAHNVE ISAGQYLQLN NVGAEIFGGY YENGTQPVFS
DSDVGNNIMV TVGKLVAALE NNDQQGCAEA LDGLKTGHQY FTTQLASVGA RENRLDVADT
VLSGLKLNET ERMSNVEDAD LATLLTELAN QQLSYEAVLK SSSMIMKMSL VNYL