| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2356 |
|---|
| Symbol | |
|---|
| ID | 8378033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2710454 |
|---|
| End bp | 2711815 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645001578 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003158852 |
|---|
| Protein GI | 256830124 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000435033 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTC GTACATCCGC GCTGGCCGCC GCGTCCGTGG CCAGTTTTCT GGTTCCGTTC
ATGATGTCCG CCGTGGCCAT CACCCTGCCG GTCATGCAGG TGGAGCTTGG GGCCACGGCC
GTGGAACTCA GCTGGATCGC GGGGAGCTAT ATCCTGGCCC TGGCCGCCAT TCTGTTGCCT
GTGGGCCGGC TGGCCGACAT TCTGGGCCGC AGGCGGACCT TTGTCTGGGG TACGGCGGCG
TTCGTGATCT TTTCGTTGTG CGCATCCCTG GCCTGGTCCG TGACCAGCCT CGTGGCTCTG
CGCGTCGTGC AGGGGGTGGG CGCGGCCATG ATTCTGTCCA CGGGCGTGGC CATCGTCACG
GAATTGTATC CGCGCACCGA GCGGGGCCGG GTCATGGGCA TCATGGTCGC CTGCGTCTAC
CTCGGCCTGT CCGTGGGGCC GCTTGTGGGC GGAATGATGA CCTCCCTGGC CGGGTGGCGC
TCGGTCTTCT TTCTGTGCTT GCCTCCGGGC CTTCTGGCCT GGATCATGGC CCGCAGGATC
AAGGACGAAT GGCGCCCGGC GCATGGCGAA GGTTTCGATC TGATCGGGAG CCTCCTGTAC
GCCGCCTTTG TGGTCTGCTG CGTCAACGGA CTGACCGGGC TGGCCAGGCC GGAGCGGGGA
CTGCCTCTGC TCGGTGCGGC ATTGATCCTG GGCGTTTTTT TCGTGCTGCG TTCGCGCAGC
GTCGCCCATC CGCTCATCGA CCTTTCGCTG TTCACGGCCA ACAGGGTCTT TCTGCTCTCG
AGCTTGGCGA CCCTGGTCAA TTACGCGGGC ACCTTCGCGG TGGGCTTTTT GCTCAGTCTG
TACCTGCAGG TGGTGAAGGG TTTTTCGCCC ATGCATGCCG GGTTCATACT GATTGTCCAG
CCCGTGGTGC AGAGCCTGCT CTCCCCTCTG GCCGGGGTCC TGGCCGATCG CTTCAACGCG
GCCTGGCTGG CCAGCCTGGG CATGGCGCTG TGCGCCCTGG GGCTGCTGGG GATGTGCGGG
GTGGACCTGC ACACCGGGTT GCTTGAGATC GGCGCGATTC TGGCCTTGCT GGGTCTCGGG
TTCGCCCTGT TCGCCTCGCC CAACATGAGC GTGGTCATGG GCAGCGTCGA ACCCCGGCAC
TACAGCATCG CCTCCAGCCT GGTCGCGACC ATGCGCACCT TCGGCATGAC CCTGTCCATG
GGCATCGCCG CCGTGGTCTT CGGTTTTTTG CTGCATGACC GCCAGATCGC CCCTGAAACG
ATCCCGGAAT TTCTGGCCAG CATGCGCATC ATCTTTGCCG TCTGCGCAGG GCTTTGCGTG
GCGGGCGTGT TCTGTTCCCT GGGGCGTGTC GGAAAACGCT GA
|
|---|
| Protein sequence | MHIRTSALAA ASVASFLVPF MMSAVAITLP VMQVELGATA VELSWIAGSY ILALAAILLP
VGRLADILGR RRTFVWGTAA FVIFSLCASL AWSVTSLVAL RVVQGVGAAM ILSTGVAIVT
ELYPRTERGR VMGIMVACVY LGLSVGPLVG GMMTSLAGWR SVFFLCLPPG LLAWIMARRI
KDEWRPAHGE GFDLIGSLLY AAFVVCCVNG LTGLARPERG LPLLGAALIL GVFFVLRSRS
VAHPLIDLSL FTANRVFLLS SLATLVNYAG TFAVGFLLSL YLQVVKGFSP MHAGFILIVQ
PVVQSLLSPL AGVLADRFNA AWLASLGMAL CALGLLGMCG VDLHTGLLEI GAILALLGLG
FALFASPNMS VVMGSVEPRH YSIASSLVAT MRTFGMTLSM GIAAVVFGFL LHDRQIAPET
IPEFLASMRI IFAVCAGLCV AGVFCSLGRV GKR
|
|---|
| |