| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2351 |
|---|
| Symbol | |
|---|
| ID | 8378028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2706621 |
|---|
| End bp | 2708216 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645001573 |
|---|
| Product | YidE/YbjL duplication |
|---|
| Protein accession | YP_003158847 |
|---|
| Protein GI | 256830119 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2985] Predicted permease |
|---|
| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000718232 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTCC TGCATAATCC CATGTTCCTG CTGCTTGCCG TCATTCTGTC CGGACACCTG
CTCGGCAAAG TCAAAATCTT TTCCTTTTCC CTGGGCTCTT CGGGCATCGT CTTCACCGGA
CTTCTGGCCG GATTCGCGGG CCTCAGCCTG CCCGGAGTGA TGCAGAGCCT GGGACTGATC
CTGTTCATCT ATTCCGTGGG CCAGCAGGCC GGGCCGGGTT TTCTGCACTC CATGAAACGC
GGAGGACTGG CGCTGAGCCT CGGGGCCTTG TCCATGGTTT TCGCGGGGTT GCTCACTGCG
CTTGGCTGCA AGGCCTGGTT CGGATTTTCC AAGGAGATCA CCGCCGGGCT CTTCGCCGGG
GCCCTGACCT CCACTCCGGG CCTGGCCGTG GCCGTGGAAC TGGCCCATGA CAGCGCCGCC
CCAGCGGCAT ACGGCGTGGC CTACACGTTC GGCGTGGTCG GGGTGGTGCT GGTGGTCAAG
CTCCTGCCGC GCCTGCTGCG CGCCGGCATC AGGCAGGAAG AAGAAAAGCT GGAGCAGGAA
CTGAGCAGCC TGCATCCGCA AATGGAGTTC ACGCACCTTC GGGTCACCAA TCCCAATCTG
TGCACCGGAC CGCTGTCCCG GGTCCTCCCC GAGCGCATGG CCGAGGTGAC CATCACCCGC
GTGCTGCGGG CGGGAACCGA AAGCCCGGAA CTGGCTGTGG CGGAAACGAT CCTGAACATG
GACGACACGG TCCGGGTGGT GGGGACGTCG GAAGCCCTGC ATCAGGCCGA GGTGGTCATC
GGACCTGTGG TGGAGGCGGA TCTGGCATTC AATTCCGTAC TCGTGAAAAA AGAAATCCTG
CTCTCCCGCC CGGACGTGGC CGGAAAGACC CTGCGCGCTT TGAACCTGAG CCATGTCTTC
GGAGTGCAGG TCTCGCGCAT CACCCGCAAC GGCTTCGACT GCCCGGCCGG AGCCAACGTC
CGATTGCGCC AGGGGGATGT GCTGCATGTG GTCGGGCACC CCGAAACCCT GGAGAATGTC
AAGAAGCTGC TCGGCGATGA CGTGCGCGCG CTTTTCGCCA CCAGCGTGAT GGTGCTGCTG
TCCGGACTGT TCTGCGGTCT GGCCTTCGGC GCGGTGCCGC TTTACCTGCC GGGGCTTGGG
ATATTCACCC TCGGCTCCAC CGGGGGGGTG CTCCTGGCGG GCCTTGTCTT CGGCGCGGTG
CGGCAGATCG GCCCGGTGAT CACCGAACTG CCCAGCACTG CCAACGCCCT GATCCGCGAC
CTGGGTCTGG GGCTTTTTCT GGCCGTGGTC GGCACGGCGG CGGGGAGCAC TCTCGTGCCC
ACGCTACGCG AATACGGTCT GCCCCTTTTC CTGGCCGGGG CGATCATGAC CCTCGCGCCC
ATGATCATCG GCGTGCCGCT CTGCACCAAA GTGCTGCGCA TCCCGTTTCT GCGCATGCTC
GGGGTCATAA CCGGCGGCAT GACCTCCACT CCGGGACTGG CCGCGGCCTC TTCCCTGAGC
GACACTCCCT ACGCCGCCAC CGCCTACGCC ACGGTCTATC CCGTGGCCCT GGTCGGCATG
ATCATGGCCT CAAAAATCAT CATGCTGCTG GGCTGA
|
|---|
| Protein sequence | MELLHNPMFL LLAVILSGHL LGKVKIFSFS LGSSGIVFTG LLAGFAGLSL PGVMQSLGLI
LFIYSVGQQA GPGFLHSMKR GGLALSLGAL SMVFAGLLTA LGCKAWFGFS KEITAGLFAG
ALTSTPGLAV AVELAHDSAA PAAYGVAYTF GVVGVVLVVK LLPRLLRAGI RQEEEKLEQE
LSSLHPQMEF THLRVTNPNL CTGPLSRVLP ERMAEVTITR VLRAGTESPE LAVAETILNM
DDTVRVVGTS EALHQAEVVI GPVVEADLAF NSVLVKKEIL LSRPDVAGKT LRALNLSHVF
GVQVSRITRN GFDCPAGANV RLRQGDVLHV VGHPETLENV KKLLGDDVRA LFATSVMVLL
SGLFCGLAFG AVPLYLPGLG IFTLGSTGGV LLAGLVFGAV RQIGPVITEL PSTANALIRD
LGLGLFLAVV GTAAGSTLVP TLREYGLPLF LAGAIMTLAP MIIGVPLCTK VLRIPFLRML
GVITGGMTST PGLAAASSLS DTPYAATAYA TVYPVALVGM IMASKIIMLL G
|
|---|
| |