| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2324 |
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| Symbol | |
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| ID | 8378001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2671893 |
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| End bp | 2675162 |
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| Gene Length | 3270 bp |
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| Protein Length | 1089 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645001547 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003158821 |
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| Protein GI | 256830093 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTCA TCCTTGCCCT GCTCCTGCTG CTGACCGTCG GCAGCCAATG TCTGGCAAAC
CCTCCGCTGG ACCTCAGTCC CGAGGAGCGT GCCTGGCTGG CCGAGCACAA GGATTCCCTG
ACCCTTTCCT TCGACCGCTC GTTCCCCCCC ATCGAATTCG AAAAACCAGA CGGCTCGTTC
ACCGGTCTGA GCGCGGACCT CGTCGCCCGG ATCGAAGAGC GCCTCGGCAT CACCTTCCGT
AAGCAGGGCA TACCCTGGAC CCAGGCCCTT GAAGGCCTGC AAGACGGAAC CACGGCGCTT
GCCCCGGCCA TCGTCAACAA CGCGGAACGC TCCGAATACA CGCTTTTCAC CCAGCCCTTT
GTCCGCATTC CCCTCGTCAT CGTCACCTCC CGCCATATGA AAGGCCCTCT GTCCCTGGAC
GATCTCGCCG GGATGCGCGT GGCAGTGGTT CGCGGCTACG CCTCGGCGAC GCTGGTCAAG
AAGGCCGGCC AAGGCCGGTT CACCGTGGTG GAATTGGAGA CCATTCGCGA AGGGCTGCGC
GACGTCTCCT TCGGAGTGGT CGACGCCTTT GTGGAGAGCC TGGCCGTGGC CGCATGGCAC
ATCGGGCAGG AAAAGCTGCC CAACCTGCGC GTCGCCGGAG ATCTGGACGT GACCCAGGAC
CTGTCCATCG GCGTCAGCAA GCATTATCCG CTTCTGGCCA GCGCCGTGGC CAAGGCACTG
ACGTCCATCC CCGAGCCTAG CATAAATAAT ATCACTGATC GCTGGATTCA CTTACCGACC
TCTTTTCTGG GCAAGCATAC CCTTGAGGCC TTGAGGCTCG CGGCGCTTTT GACGGCCGTC
GTCTTCCTTG TCCTGGCCGG AATCGCCTGG GCTCTGAGCC GCACGCTGCG CAAAAAGATC
AACGATCTCA AACGCACCGA GTCCGCTCTG ACGGAACAGG TCGACCGCTT CCGCCTGGCC
CTGGAAACCA CCCAGGCCGG ATTCTGGGAA CACTACCCGG CAGAAGGCCG GGAAGTGCAC
AGCCCGGAAT GGTACGCCAT GCTTGGATAC ACTCCCCAGG CCGTTACGGG CGGCGTGGAG
GACTGGACCG CCCTGATCCA TCCCGAGGAG CGGGAAAAAG CGCTGGCCAG CTTTTCCGCC
TACATCAGCG AAGGCGGCAA GGGCATGTAT GAAGCCCAGT ACCGCCTACG CGCCAAGGAC
GGTTCCTGGC GCTGGATCAT GGGCAAAGGC CGCGCCGTTT CCTGGGACGA CGAAGGCCGG
CCGACGCGCA TCATCGGCCT CAATCTGGAC ATTCAGAAAA GCAGGCAAGA TCAGCTCGAA
ATGCAGCGCA CCCAGACCCT CAACAAGGCG CTGCTCGAAC AGACCACGCA ATTCATCGGC
CTGCTCGACC TGCAGGGGAA TCTCCTCGTC GCCAACCGCA CGAGCATGGA ATGGATCAAA
GCAAAGCCGG AGGAAGTCCT GGGGAAACCA TTCTGGGACG GACCCTGGTG GCCGGACAAA
ACCAAAGCCG AGTTTCTTTT GCTGCAACTC ATCGATCAGG TCAGAGAGGG CAAAACCGTT
CGGCGCGAGA TCGTGCACGC CGATTCCGAA GGCAGGGAAT CGTTCTTCGA TTTCACGATG
TCTCCGTTCC GCAATGAAAC AGGTCAGGTC GTCAACTTCA TCGTTGAAGG CCGCGACATC
TCCATGCTCA AGAAAAAACA GCAGGAGATC ATGGAAAGCG AGAAGCGGTT CCGCACGATT
TTTGAAAACG CGCCTTACTC CATGGTCATC ACCCGCCTTT CGGACGGCAA GTACATGGAC
GCCAACACTG CCTTTCTGGA CCGGATGAAC ATCAGCCGCG AGAATCTTCT CACGCTTTCT
CCCAAAGACG TCGGAACCTT CGGCCAAGCG CACCAGCAGG AAATATTACT GCGCCTCAAG
GCCAGCCGCA ACATCCACAA CATGGAAACC CAGGTGCAAA GGCCCGACGG CACGACCGGA
CACATCCTGT ATTCGGGCGG GCTCATCACC CTTGACGGCG AGGCCTGCAT CCTGTCCATG
ACCGTGGACA TCACCGAACT CAAACAGGCC CAGGAAGAAC TGCGCCGTTC CAAGGAGATG
TTCGCCCGTC TTTTCCAACT CTCTCCGGAC ATCATCACCC TGGCTAGGCA GGAAGACGGT
GTCCTTCTGG AGGTCAACGA AACCTTCTCG CGCACCACCG GCTACTCCCG GGACGAAGCG
CTGGGTAAAA GCACGCTGGA TCTGACCATC TTTGCCGCGC CCGAAAGAAG GACCGCGTTC
GTGCAGGCCC TGCTGCGCGA CGGACAGGTC GACAACTTTG AATTCGAAAT GCGCCACCGT
GACGGACACA CCCTGCAGTG CTCGACCTCG GCCAGGCTGA TGAACATCGA CGATACGCCC
TGCATTCTGG CCATCACCCG CGACATAACG CATCTTCGGG CCTTGCAGGA CAGCATGATC
CAGTCCGAAA AAATGCTCTC CCTCGGGGGC ATCGCCGCCG GCATCGCCCA CGAGATCAAC
AATCCGCTCG GCATCGTGCT GCAGGCGGCC CAGACCATCA CCCTGCGCAC CAGAGCCGAC
TTCCCCAAGA ACATTGAAGC GGCCGCGAAG GTCGGCGCGG ATCTGGGCCA GGTGGACCGC
TACCTCAAAG AGCGCAAAGT CGATGTCTTC ATTCGCGATA TCCAGGGCGC AGCGGTCCGG
GCGGCGGAGA TCATCCGCCA CATGCTCGAT TTCAGCAGGC GCAGCGAGTC GAGGCACTCG
GTCTGCGACA TAAGGGTCAT CCTTGAAAAC TCCCTGCGCC TCGCCTCCAG CGACTACGAC
CTCAAGAAAA ACTACGATTT CAAATCCATC AGAATCGAGA AGGACGTAGA GGACAACCTG
CCCTGTCTGC TGTGCACGGA AACGGAAATC GAGCAGGTCC TTCTCAACCT GCTGCGCAAC
GCGGCCCAGG CCATGGCTGA AGCCGAACCG CCCCTTCCCG ATCCCTGCAT CGGCATCCGG
ATCAGAAAGA TGGAAACGGG GCTGCGCATC GACATCAGGG ACAACGGACC CGGCATCTCG
GCGGAGAACC GCAAACGCAT CTTCGAACCC TTCTTCACCA CCAAGACCGC CGGGGCGGGC
ACCGGCCTTG GGCTGTCCGT ATCCTACTTC ATCATCACCA AGGGACACGG CGGAGCCATG
TACGTCACCG CCCCTGCCGA GGGCGGGACA GTTTTCAGCA TCGAACTGCC CGGAACAACG
GAATCCGTAA AACATGAAGC CCATGCCTAG
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| Protein sequence | MRFILALLLL LTVGSQCLAN PPLDLSPEER AWLAEHKDSL TLSFDRSFPP IEFEKPDGSF
TGLSADLVAR IEERLGITFR KQGIPWTQAL EGLQDGTTAL APAIVNNAER SEYTLFTQPF
VRIPLVIVTS RHMKGPLSLD DLAGMRVAVV RGYASATLVK KAGQGRFTVV ELETIREGLR
DVSFGVVDAF VESLAVAAWH IGQEKLPNLR VAGDLDVTQD LSIGVSKHYP LLASAVAKAL
TSIPEPSINN ITDRWIHLPT SFLGKHTLEA LRLAALLTAV VFLVLAGIAW ALSRTLRKKI
NDLKRTESAL TEQVDRFRLA LETTQAGFWE HYPAEGREVH SPEWYAMLGY TPQAVTGGVE
DWTALIHPEE REKALASFSA YISEGGKGMY EAQYRLRAKD GSWRWIMGKG RAVSWDDEGR
PTRIIGLNLD IQKSRQDQLE MQRTQTLNKA LLEQTTQFIG LLDLQGNLLV ANRTSMEWIK
AKPEEVLGKP FWDGPWWPDK TKAEFLLLQL IDQVREGKTV RREIVHADSE GRESFFDFTM
SPFRNETGQV VNFIVEGRDI SMLKKKQQEI MESEKRFRTI FENAPYSMVI TRLSDGKYMD
ANTAFLDRMN ISRENLLTLS PKDVGTFGQA HQQEILLRLK ASRNIHNMET QVQRPDGTTG
HILYSGGLIT LDGEACILSM TVDITELKQA QEELRRSKEM FARLFQLSPD IITLARQEDG
VLLEVNETFS RTTGYSRDEA LGKSTLDLTI FAAPERRTAF VQALLRDGQV DNFEFEMRHR
DGHTLQCSTS ARLMNIDDTP CILAITRDIT HLRALQDSMI QSEKMLSLGG IAAGIAHEIN
NPLGIVLQAA QTITLRTRAD FPKNIEAAAK VGADLGQVDR YLKERKVDVF IRDIQGAAVR
AAEIIRHMLD FSRRSESRHS VCDIRVILEN SLRLASSDYD LKKNYDFKSI RIEKDVEDNL
PCLLCTETEI EQVLLNLLRN AAQAMAEAEP PLPDPCIGIR IRKMETGLRI DIRDNGPGIS
AENRKRIFEP FFTTKTAGAG TGLGLSVSYF IITKGHGGAM YVTAPAEGGT VFSIELPGTT
ESVKHEAHA
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