| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2311 |
|---|
| Symbol | |
|---|
| ID | 8377988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2655596 |
|---|
| End bp | 2657713 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645001534 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003158808 |
|---|
| Protein GI | 256830080 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA TACTCAGGAA ATACGTGGTG TGGGTCGTGG CCGGGTTGCT GCTCGTGGCT
TTCGGGCTGG GCACAGGGTA CATCCTGTGG GCTCCTTCCG GGTCCGGGCA TGACGGACAC
GACCATGCCG GGCAGGAGGC CGCGGCAGGC GCCCCCTCCA CGTCATTGTG GACCTGCTCC
ATGCATCCCC AGATCAAGCT GCCCGAGGCC GGACAGTGTC CCATCTGTTT CATGGATCTC
ATACCTCTGG CCATCCCCGA CGGCGAAGGA CGCAGGACGA GCCTGCGACA GCTGACCCTC
TCCGAGGACG CGGCGCGACT GGCCGGCATC CGGGTGGAGG CTGCGCGGCT GACCGATGTC
TCCGTGCAGA CCCATCTTTT CGGCAAGGTG GCCTACGACG AGTCACGGGT CGGCGTCATC
ACGGCCTGGA TCGGCGGCCG CATCGACAGG CTCCATGTGA ATACGACCGG CGAGGTTGTC
CGCGCCGGAC AACCCATGGC CCTCGTCTAC AGCCCCGAGC TGGTGGCGGC CCAGGCCGAA
CTCATCCAGG CCGTGCGAGC CCGCCAGAGC ACCTCCGGCG GCAGCCGCCT CGTCGCGGAC
GCCGCCCAAC GCATGGAGAA CGCCGCCCGC GAGAAATTGC GCCTGCTGGG CATGGGCAAG
GCGCAGATCG ACGGCATGGT CAAACGCGGG ACTCCGGCGG ACCACGTTAC CCTGACCGCG
CCGCAGCCGG GTATCGTCAT CGAGAAGAAG GTGGTGGAGG GCATGTACGT GCAGACGGGG
ATGCCCATTT ATGCCGTGGC GGATCTCTCG AAGGTTTGGG TGGTGCTCGA AGCCTACGAG
TCGGACCTGG TCTGGATGGC CCCGGGCAAG GAGGTCGCCT TTAGTGCCCA GGCCCTGCCT
GGACAGGAAT TTACGGGCAA GGTCGTTTAT GTGGGCACGT CCGTGAACCC GGCCACGCGC
ACCGTGGAGG TGCGCGTGGA GGTGCCCAAC CCCGGACTGG CGCTGAAGCC CGGCATGTTC
GTGAGCGCGG TGCAGACGGA CGGGCAGGAG GCGCGGTCGC GCGAGCTGGT CGTTCCGGCT
TCGGCCCCGC TCATCACCGG GAAGCGCGCC GTGGTCTACG TGGCCGACGC AGAAAGGCCC
GGCGTGTACG AGGGACGGGA GGTGGTGCTT GGGCCCCGGA CCGACCAGGG GTACGTGGTC
CGCAGCGGCA TAGCCGAGGG CGAGCTGGTG GTGGTGCAGG GCAATTTCCG CATCGACGCG
GCCCTGCAGA TCGTGGCCCG GCCGAGCATG ATGAATCCGG CCGAGGCCCC GGCCATTGCC
GGGGCGCGCT TCGCGGATGT CCCACAGCCC TTCAGCGTCC GCCTGGCGGC CCTGGCCCAG
CGCCTCGGGA CCGTCGAGGA AGCGGTGGCC GCAGGTGGCC TGGACGCCGT GCGCGGCGCG
TATCACGAGT TCGGCAAAAC CCTGAACAGC GTGGACGCCG ACGCCCTGGA CGGCGAGGCG
GCCCTGGAGT GGAAGGAGCT GTCCATGCTC CTGTCCAACG ACGCGCTCCT TGGTTACGAG
TCGCCCACCC CGCGCCGCGC CGTCCAGGTG TTGGACGACA TGCGCGGTCA TTTCGCTCGG
GTCCGGGCCG CGTTCCCTCT TCATGAACTC GCGGCGAAGA TCGAGGCTCC GGCCGGGTTG
CGCAGCGCCC TCGACGCCCT TTATGCCGCC TATGTCCCGG TACAGGAAGC CCTGGCCGGC
GACGATACGG CCAGGGCCCA CGCGGCGCTC ATCCTTTTTC GGCAGGCCCT CGGGCAGGCG
GACGAGAACG CCCGCCTTGC CGGCGACGGC GAATGGGGAC GCTACTCCGA GGCCATCGCC
TCGGGTCTTG GCGAGATGGA GCAGGCTGCG GACATGGACG CTTTGCGCGC CGGTTTTTTT
CCGCTGTCCG TGGCTATGAT CGGAATGGTC GAAGCCTACG GCGCGGGACA GGGACCGGTC
TACGAACTCT ACTGTCCCAT GGCTTTCGGC AATCAGGGCG CGACCTGGCT GCAGAGTGAC
CCACAGGTCG ACAACCCCTA TTTCGGGGCC TCCATGCTGC GCTGCGGCGA GGTTAAACGC
CAGCTGAAGG ACGAGTAG
|
|---|
| Protein sequence | MNAILRKYVV WVVAGLLLVA FGLGTGYILW APSGSGHDGH DHAGQEAAAG APSTSLWTCS
MHPQIKLPEA GQCPICFMDL IPLAIPDGEG RRTSLRQLTL SEDAARLAGI RVEAARLTDV
SVQTHLFGKV AYDESRVGVI TAWIGGRIDR LHVNTTGEVV RAGQPMALVY SPELVAAQAE
LIQAVRARQS TSGGSRLVAD AAQRMENAAR EKLRLLGMGK AQIDGMVKRG TPADHVTLTA
PQPGIVIEKK VVEGMYVQTG MPIYAVADLS KVWVVLEAYE SDLVWMAPGK EVAFSAQALP
GQEFTGKVVY VGTSVNPATR TVEVRVEVPN PGLALKPGMF VSAVQTDGQE ARSRELVVPA
SAPLITGKRA VVYVADAERP GVYEGREVVL GPRTDQGYVV RSGIAEGELV VVQGNFRIDA
ALQIVARPSM MNPAEAPAIA GARFADVPQP FSVRLAALAQ RLGTVEEAVA AGGLDAVRGA
YHEFGKTLNS VDADALDGEA ALEWKELSML LSNDALLGYE SPTPRRAVQV LDDMRGHFAR
VRAAFPLHEL AAKIEAPAGL RSALDALYAA YVPVQEALAG DDTARAHAAL ILFRQALGQA
DENARLAGDG EWGRYSEAIA SGLGEMEQAA DMDALRAGFF PLSVAMIGMV EAYGAGQGPV
YELYCPMAFG NQGATWLQSD PQVDNPYFGA SMLRCGEVKR QLKDE
|
|---|
| |