| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2309 |
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| Symbol | |
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| ID | 8377986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2648357 |
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| End bp | 2651524 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645001532 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003158806 |
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| Protein GI | 256830078 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC AAATTTTCTT TGCGGGCTGC GACGCGAACC ATTCGGGCAG TCATGTCTTC
AGACCGTCGC GACACGTCGT GGCGTTGCTC GCGTTCATGC TGCTCGTCTT CATCCTGCAA
ACGCCGCGAA CTGCCGTCGC ATCCGAACCA TCGTCACCCG TCATCTCGGC CGCCGAGATC
GATTACCCGC CTTTTTCCAT TGTCGATGAA ACGGGCCGCG CAGACGGTTT TTCCGTGGAA
CTTCTGCGTG CCGCCCTGGC CGCCATGGGC CGCGACGTCA CCTTCCGCAC GGGGCCCTGG
GGCGAAGTCA AGGGCTGGCT GGAAAAGGGT GACGTGCAGG TCCTGCCCCT GGTCGGCCGC
ACGCCCGAGC GTGAAGAACT CTTTGATTTC ACCGTGCCTT ACATGTCCCT GCACGGGGCC
ATCGTGGTGC GCTCCGGGAC GGAAGATATC CAGAGCCTGG CCGATCTCAA GGGACGGCGG
GTGGCCGTCA TGCGCGGCGA CAACGCCGAG GAATTTTTGC GTCGAGAAGA ACGCGGCATA
CTGATCCAAA CCACGCCCAG CTTCGAACAA GCCCTGCACG AGTTGTCCCA GGGACGTCAC
GACGCCGTGG TCGTGCAACG CCTTGTGGGG CTGCGCCTCA TCTCTAAAAC AGGACTTGCG
AACCTGCGGA TCGTCGACAA GCCCATCGAG GGCTTTCGTC AGGATTTCTG CTTCGCCGTC
AAGAATGGCG ACAGCCACAT GCTGGCCTTG CTCAACGAAG GCCTCGCCAT AGTCATTGCC
GACGGGACCC ACCGCCGTCT CCACGCCCGG TGGTTCGCCG CCCTGGAACT GCCGGGACAG
CGCCGCCTCA TCGTGGGCGG TGATCATCGT TATCCTCCGT TCGAGTATCT GGACGAAAAG
GGAAACCCGG CCGGTTTCAA TGTCGAGCTC ACCCGGATGA TTGCCAGGGA GATGGGGCTT
GATGTTGAAA TCCGTCTCGG ACCCTGGGCC GATGTGCTGC GCGATCTGGA GCGAGGCGAA
ATCGATGCTG TTCAAGGCAT GTTCTATTCT GTGGAGCGGG ACCGTAAATT CGACTTCACC
CAGGCTCACT CTGTGAACAA TTACGCTGTT GTGGTGCGAC GCGGAGAAAG CGCTCCGCCG
GTTTCATTGA GCGATCTCAA AGGCAAGCGC ATCGTCGTTC AGAAAGGAGA TGTCAGTCAC
GACTATCTGT TGCAGCGAGG CCTGGAGTCC CAGATTTTCA CCGTGGAGAG CCCGGAGGAC
ATGCTTAAGG AACTGGCCGA GGGAAAATAT GACTGCGCGC TGGTCCCCCG CATCGTCGCC
CTGCACATCA TCAAGGCGCG CGCCTGGACA AATCTGCAAC TGAGCCAAAA TTCGTTTTTT
TCACTGGATT ACTGCTATGC CGTGCCCAAT GGGCATGCGG CGCTTCTGGC GCAGTTCAGC
GAGGGGCTGC AGGTTGTCAA GGATTCCGGC GAATACCGTC GTCTCCACGA AAAATGGATG
GGCGTGTACG AGCAGCACCC CCCGTCGTTT GCCGCCATCC TGCGCAATCT CGCCATGGTC
GTTGCGCCGC TGCTTCTGCT CTTGTTCGGA TTTTTTCTTT GGTCCTGGAT GCTGCGTAGG
CAGGTGAAAA AAAGGACGCG AGAGCTGCAG GAAAGCGAGG AACGTTTCAA AGTCCTTCAC
AATGCCTCTT TCGGCGGCAT CGCCATTCAC GACCAGGGCA TCATCCTGGA CTGCAATCAG
GGGCTCTCCG AAATAACCGG CTATTCCGCA GATGAACTGA TCGGGATGAA TGGCCTCATG
CTCATATCCG AAGACTCCCG CGATATGGTT ATGAGCAATA TCCTGTTTGG AGACGACGGC
CCCTATGAGG CGTTGGGCCT TCGCAAAAAC GGGGAAGAGT ATCCCGTCCG CCTCGAAGCA
CGTAACATCC CATATAAAGC AAAGCATGTA CGGGTTACGG AGTTTCGGGA CATAACCGAA
CAAAAACGGG CTGAAGAAGC TCTGCTGCAG GCAAAGACGC AAGCAGAGAC CGCCAACCAG
GCAAAAAGCG AATTTCTGGC CAACATGAGC CATGAGATCC GTACTCCCAT CAACGGCGTC
ATGGGTATGC TCCAACTGCT GGAGACCACC CCGCTTGACG CCGAACAGGC CAGCTACATC
CACATGGCCA CAGAGGCCGC CAACCGCCTG ACCAGACTCC TGACGGACAT TCTCGACCTC
TCCAGGGTGG AGGCCGGCAA GATGGAGATT CGCGAAGCAC CCTTCCAGAT TCAGGACATC
ATCGATTCCG TCTCCGGACT TTTCGCCGTC ACGGCCAGAA ACAAGAACGT GGCCCTGGAA
TGTCGCTTGG CCCCGGGCAT GCCCGAAGTC CTGGTCGGAG ATGAAATGCG GGTGCGTCAG
GTGCTCTTCA ACCTGGTGGG CAACGCCCTC AAATTCACGG AGCGCGGCAG GGTCGTCATG
GACATCACGG CCTTGCCCGC AAAGGATGAC GGCGACTATC GCGTGCATTT TCGCGTCACG
GACACAGGCA TCGGCATCGC CGAAGACAGG CTTGGCGACA TCTTCGAGCC GTTCCGGCAG
GTCGAAAACT CCTTGACCCG AAATTACCAG GGCGCCGGAC TGGGCTTGTC CATCGTGCAA
CGGCTGGTTG GCCTCATGGG CGGGACCATC ACCATCGAGA GCACCCTGGG TCAAGGCACG
AGCGCGCATG TCGTCCTGCC CTTCAAGACA CAGGGAGATT CGTCAGCAGG CGCCGCCGAA
ACATTTTTCA CCGGGTCTGG CGACAGACTG CACGTGCTCC TGGTCGAGGA CGACCCGTCC
AACCGCCTCC CGATCCAGAA GCTCCTGGAA AAGGCTGGAC ATGAGGTGCT TCTGGCCGAA
AACGGCCGGC AGGCTTTTGA ACTGCTGGCC GCAAGCGATA TCGACTGCAT CCTCATGGAC
ATCCAGATGC CCGTCATGGA TGGGATCGAA GCGACCCGCA TCATCCGCGA ATCCGCCGCC
CTCGGCCCCA AGAAGGACGT CCCCATCATC GCCCTGACGG CCTACGCCAT GGACGGAGAC
AAGGAGAAGT TCCTGGCCGC CGGCATGAAC GGATATGCGG CCAAACCCGT AACGATCGAG
AACCTCCTGC AAAAAATGGA TGAAGTGCTG GCAGGGCGGC GGCGTTAG
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| Protein sequence | MSEQIFFAGC DANHSGSHVF RPSRHVVALL AFMLLVFILQ TPRTAVASEP SSPVISAAEI
DYPPFSIVDE TGRADGFSVE LLRAALAAMG RDVTFRTGPW GEVKGWLEKG DVQVLPLVGR
TPEREELFDF TVPYMSLHGA IVVRSGTEDI QSLADLKGRR VAVMRGDNAE EFLRREERGI
LIQTTPSFEQ ALHELSQGRH DAVVVQRLVG LRLISKTGLA NLRIVDKPIE GFRQDFCFAV
KNGDSHMLAL LNEGLAIVIA DGTHRRLHAR WFAALELPGQ RRLIVGGDHR YPPFEYLDEK
GNPAGFNVEL TRMIAREMGL DVEIRLGPWA DVLRDLERGE IDAVQGMFYS VERDRKFDFT
QAHSVNNYAV VVRRGESAPP VSLSDLKGKR IVVQKGDVSH DYLLQRGLES QIFTVESPED
MLKELAEGKY DCALVPRIVA LHIIKARAWT NLQLSQNSFF SLDYCYAVPN GHAALLAQFS
EGLQVVKDSG EYRRLHEKWM GVYEQHPPSF AAILRNLAMV VAPLLLLLFG FFLWSWMLRR
QVKKRTRELQ ESEERFKVLH NASFGGIAIH DQGIILDCNQ GLSEITGYSA DELIGMNGLM
LISEDSRDMV MSNILFGDDG PYEALGLRKN GEEYPVRLEA RNIPYKAKHV RVTEFRDITE
QKRAEEALLQ AKTQAETANQ AKSEFLANMS HEIRTPINGV MGMLQLLETT PLDAEQASYI
HMATEAANRL TRLLTDILDL SRVEAGKMEI REAPFQIQDI IDSVSGLFAV TARNKNVALE
CRLAPGMPEV LVGDEMRVRQ VLFNLVGNAL KFTERGRVVM DITALPAKDD GDYRVHFRVT
DTGIGIAEDR LGDIFEPFRQ VENSLTRNYQ GAGLGLSIVQ RLVGLMGGTI TIESTLGQGT
SAHVVLPFKT QGDSSAGAAE TFFTGSGDRL HVLLVEDDPS NRLPIQKLLE KAGHEVLLAE
NGRQAFELLA ASDIDCILMD IQMPVMDGIE ATRIIRESAA LGPKKDVPII ALTAYAMDGD
KEKFLAAGMN GYAAKPVTIE NLLQKMDEVL AGRRR
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