| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2288 |
|---|
| Symbol | |
|---|
| ID | 8377963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2626543 |
|---|
| End bp | 2627955 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645001510 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_003158786 |
|---|
| Protein GI | 256830058 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0625134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAT TTCCAACGTA TCCTGTCCTG CTCGTCGATG ACGAGGACAC GTGGCTGCGG
TCCTTTTCCC TGGCGCTCAA ATCCCACGGA ATCGACAACA TCCTCTGCTG CAACGACAGC
GCAAAGGTGC CTGAAATCCT GGCCACGACC GAAATCGAGG TCATGGCCGT GGATCTGGCC
ATGCCCGGCC TGTCCGGGCA GGAACTCATC GACGCCGTGT CCGCGACCAA CCCGGACATC
CCTATCCTGG TCATCACCGG CATGAGCCAG GTGGAGACCG CAGTGCAGTG CATCAAGCGC
GGCGCTTTTG ATTTCTTCGT CAAGACCAAC GACAAGAGCA GCCTGGTTTC CGGCATCCGA
CACGCCATCG AAATCCGCGA ACTCAAGCGC GAAAACAGCA GCCTGCGCAC CCGCTTCCTG
CAGGACACCC TGGAACACCC GGAGGCCTTT ACGCCCATCG TGACCTGCTC CAAGGTCATG
CGCTCCATTT TCCAGTATAT CGAAGCCATC GCGCGCAGCA CCCAGCCCGT GCTCATCACC
GGCGAATCCG GGGTCGGCAA GGAGCTGGTG GCCAAGGTCA TCCACGATTT AAGCGGACGG
CAGGGCGAAT TCGTGCCGGT CAACGTGGCC GGCCTTGATG ACAACATCTT TGCCGACACC
CTGTTCGGGC ACAAGAAAGG GGCCTTCACC GGCGCCGACA GGGCCCGCCC CGGCCTGGTC
GAAAACGCCA AGGCCGGCAC CCTCTTTCTG GACGAGATCG GCGATCTCCC GCAGGCCTCG
CAGGTCAAGC TGCTGCGCCT GGTGCAGGAA CGCGAATACC TGCCCATCGG CTCCGACGTG
ACCCGCAAGA CCGACGCCCG CATCATCGCG GCCACCAATG TCGATCCGGA GAGCATGGGC
GAAACGGAAC GCTTCCGCTC CGACCTGTAC TACCGCCTGC GCGGCCATCA CGTGCACCTG
CCCCCCTTGC GCGAGCGCCT GGAGGACCTG CCTCTTTTGA TCGACCACTT CCTGCGTCAG
GGCTGCCAGC AGCGCAAGCG CCCCGCAGTG CCGGCGGAAC TCCTGACCCT GCTCCTCGGC
TATGACTTTC CGGGCAACAT CCGCGAACTG CAGTTTCTGA TCCTGGATGC CCTGAGCTGC
TCCGGCGACG AAGAACTGAA CATGGACCGC ATCAAGGCGC ACGTAAACAA GCACCCCGCC
GCAGCCCGCA AGGTCCAGCC CGGTGAAGGC ACCAGGCTGC AATTCGGCCC GGAACTGCCG
ACCTTGAAGC ATGTCTGCGC CGAACTCGTG CGCGAAGCCA TGCGCCGCAC CGGAAACAAT
CAGGCTCTGG CCGCGAGCAT GCTGGGCGTA TCCCGGCAGG CGCTCAACAA GCGTCTCAAC
AAGCTCCGCG AAAAAGAGGA CGGCCAGGCG TGA
|
|---|
| Protein sequence | MTKFPTYPVL LVDDEDTWLR SFSLALKSHG IDNILCCNDS AKVPEILATT EIEVMAVDLA
MPGLSGQELI DAVSATNPDI PILVITGMSQ VETAVQCIKR GAFDFFVKTN DKSSLVSGIR
HAIEIRELKR ENSSLRTRFL QDTLEHPEAF TPIVTCSKVM RSIFQYIEAI ARSTQPVLIT
GESGVGKELV AKVIHDLSGR QGEFVPVNVA GLDDNIFADT LFGHKKGAFT GADRARPGLV
ENAKAGTLFL DEIGDLPQAS QVKLLRLVQE REYLPIGSDV TRKTDARIIA ATNVDPESMG
ETERFRSDLY YRLRGHHVHL PPLRERLEDL PLLIDHFLRQ GCQQRKRPAV PAELLTLLLG
YDFPGNIREL QFLILDALSC SGDEELNMDR IKAHVNKHPA AARKVQPGEG TRLQFGPELP
TLKHVCAELV REAMRRTGNN QALAASMLGV SRQALNKRLN KLREKEDGQA
|
|---|
| |