| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2237 |
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| Symbol | |
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| ID | 8377911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2578188 |
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| End bp | 2579858 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645001458 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003158735 |
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| Protein GI | 256830007 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACA AAATTGGTTT GATGTACAGG CGTTATACGT CCAAACGACC GCTCAGGAGG
CGTGCGTACA CCTTGCCGTC GAGTTTTAAG GCCCTGCAAA CGCTTCCGGG AAGCAAACAC
GAGGCTGGCG AAAAGACCGT GCGAGAAGCA AGAACAGGCA CTCATGACGA GGCGCTTTCC
GACAGGCAAG AAGAAGTTTT GAAGGTGGTC AAGAAGGCGT TGCGGGTGCG CAAAAATGCC
GAAAAGGTCA AGATCGATTC CTGTTCGGAA ATGGAAACTA CGCTCCGGGA AGCAAACGAG
AAACTCGTCG TCGCCTCGGT CAATGCGCAT ATGATGACCG AGGCGGTCGA GCGGGTCTCG
GTTCATTTGT CCTACATGGC CGAGCATGAT CTGCTCACCG GATTGCCGAA CCGGGCGCTT
TTGACCGACC GTCTGGTGCA GTCGATCCTG CTCGCAAAGC GCCACGGCAA CAAAGTGGCG
CTGATGTTTC TGGACCTCGA CCACTTCAAG CATATCAACG ACTCCCTGGG GCATGGGATT
GGCGATCAGT TGCTGCAATC CGTTGCAAAG CGTCTGCAGG CCAGCGTCCG TAATTCGGAT
ACGGTCAGCC GTCACGGCGG TGACGAATTC GTGGTCCTGC TTCCGGAAGT CGAGGATGTG
CAGAGCGCCG CCCACGCCGC TGAGAAACTG ATTCACAGCG TGGGAGAGCC CCATTTCATT
TCCGGACAAG AGCTCCGCGT CACCTTGAGC GTCGGCATCA GCATGTATCC GGATGACGGT
GTCGACGCCG AAGCGCTGAT GCGCAAGGCG GACATGGCGA TGTATCAGGC CAAAAAGGCC
GGTCGCAACA GCTACAAGAT ATTCACCCCG AGCATGAACC CGAGTTCCAG TTCAGCCATG
CGCAAGTCCG CCGAGATGGC TCTGAAGCGC GCTCTCGACC ACGGCGAATT CATCCTGCAC
TACCAACCGA CGGTGAATCT GGAGACCGGC GTCATCACCG GCGCCGAGGT TCTGCTGCGC
TGGGAGCGTT CCGATCATCA GCTCAACTTC CCGGCTCAGT TCCTCACCAT TGCCGAGAGC
TGCGGGCTCA TTCTGCCGAT TGGGCAGTGG GTGATCCGTG AGTCCTGCAG GCAGGCGCAG
GCGTGGCTGC AGACGGGCTT CAACCTGAGC CGGATCGCGG TCAATGTCTC GGCGGTTGAA
TTCAGGGACA AGAATTTTTT GACTGGAGTT CGTGCCATCC TGCGCGAGAC GGGACTGGAT
CCGCATTTTC TGCAGATTGA AATGAGCGAG AACGGCCTGT CGCGGGATGC GCAACAGGCT
CTGCCTGCCT TGCATGCGCT CAAGAACCTT GGAGTGCAGA TTGCCGTGGA TAACTTCGGC
ACAGGGTATG CGAGTTTGAG TTTTTTACGG GAATTTCCGA TCGGTACGGT CAAGATCGAC
AAGTCGTTCG TGCACAACAT CGAGGCCAAA TCAGGAAAGG CGGTGGCCTC CGCCCTGCTG
GCGATGGCGC GGGGCTTTAA TCATCAAATC GTGGCCGAAG GCATTGAAAC GCAGACGCAG
CATGCCTTCT TCAAAAAACA TCACTGTGCC GAAGGACAAG GATACTACCT CGGTCGGCCA
ATGGCCACCG AAGCCTTCGC GGCACTCGCT TCTCAAAGAA ATCCCTCGTA A
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| Protein sequence | MLNKIGLMYR RYTSKRPLRR RAYTLPSSFK ALQTLPGSKH EAGEKTVREA RTGTHDEALS
DRQEEVLKVV KKALRVRKNA EKVKIDSCSE METTLREANE KLVVASVNAH MMTEAVERVS
VHLSYMAEHD LLTGLPNRAL LTDRLVQSIL LAKRHGNKVA LMFLDLDHFK HINDSLGHGI
GDQLLQSVAK RLQASVRNSD TVSRHGGDEF VVLLPEVEDV QSAAHAAEKL IHSVGEPHFI
SGQELRVTLS VGISMYPDDG VDAEALMRKA DMAMYQAKKA GRNSYKIFTP SMNPSSSSAM
RKSAEMALKR ALDHGEFILH YQPTVNLETG VITGAEVLLR WERSDHQLNF PAQFLTIAES
CGLILPIGQW VIRESCRQAQ AWLQTGFNLS RIAVNVSAVE FRDKNFLTGV RAILRETGLD
PHFLQIEMSE NGLSRDAQQA LPALHALKNL GVQIAVDNFG TGYASLSFLR EFPIGTVKID
KSFVHNIEAK SGKAVASALL AMARGFNHQI VAEGIETQTQ HAFFKKHHCA EGQGYYLGRP
MATEAFAALA SQRNPS
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