| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2229 |
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| Symbol | |
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| ID | 8377903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2568092 |
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| End bp | 2570359 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645001450 |
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| Product | Patched family protein |
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| Protein accession | YP_003158727 |
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| Protein GI | 256829999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.271746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACC TCGCCAGCCT GGTCACCCGC TTCCCCATAC TCTGCCTCGT GCTGTCCCTG
TGCCTGGCCG CCCCGTTCCT GATCCAGCTT CCCCGCATCC AGACCGTGGA CAATGTGGAT
TATTTCACCG TCGAGGACGA TCCGGACGTC GCCTTTTACC AAAGCATCAA GGACACCTTC
GGAGAAGACG AATTCTTCGT GATCGCCTTT TCAAATCCTG AACTTTTCAC GCCCCCCATC
TTGCGCATGA TCGCGGCCAT CACGCAGGAA CTCGAAACCA TCCCCGAAGT CCGGGAAGTA
CAAAGCCTGG CCAATGTGGA CTACATCCAC GGCGAAGAGG AATATTTCGA AGTCCGCCCC
TTCCTGGAGC GCATTCCGGA AGATGCTCCG GGACTGGCCG TCCTGCGGAA GCAGGCGCTG
GGCAACCCGC TGTATGTCGG CAACCTCGTC TCCGCCGACG GGGAGACCAC TGCCCTGGTG
GTCTTTCCCA CAGCGCACGA GGCAGGGGAC GGAAGCTTTC GCAAGAGGCT CATCGAACAG
ACCGAAACGG TGCTCGCCAA ACATGAAGCG CTCGCCGGCC GGTTTCACCT GGCCGGCTGG
ACCATGACCA ACTTCAGCCT CAGCCAGTAC ATGAAGTCGG ATGTGGCCGT GTTCATTCCG
GTGACCTACC TGTTCATCAC CCTGACCATC TGGCTCTTTT TCCGCAACGT GCGTCTGACC
CTGCTGGCCC TGGCCAACAT CTCCATGTGC ACGGGGGCGA CCATGGGTCT CTTCCCCCTG
CTCGGCATCA CGCTGAACAA CGTGACCACC GTTGTACCGC CCCTGGTCAT GGCCCTGGCT
CTGGCCGATT CCGTACACAT TTTCGCCCAT CTGGATAAAA AACTGCTGGA TGATGCCCCA
TCACCCGCCA AGGCCATGGA GAGCATCCTG CATCGGGTCA TAACCCCCTG CTTTCTGACC
AGCCTGACTA CGGCCGTGGG CTTCATCTCC CTTGTCGTGA GCGACATTCC GCCGATCAAG
GAATTTGGAT ACGTGGCTTC GGCGGGCATG ATCTTCGAAT TTCTGTTCTC CTTCCTGCTG
CTGCCGCCGC TCATGCTCAT GTGCAGGCCC GACGCCATAT ACACACACCA GCGCAAGGAC
ATCGGCATGG GCGCCTTTCT GGGCCGCCTC TCCACGTTGG TGCAGACCCA CGCCCGCCCC
ATAACCATCT TCATCGCGTT CCTGACCCTG GGCGCTTTGT GGGCGGCCTC GACGATCCGG
GTCGAGACCA ACCTGCTGGA GTACTTCAAG CCTTCAAGTC CCCTGCGCCA GGAGCTTTCC
TACATCGAAC CCCGCCTGAG CGGGGTCGGC ACGGTGGACA TTTCCGTCAA AGCCGGGGAG
CGGGATGCCT TGCGCGACCC GGACAAGCTG GCCGTGATCG ACAGGCTGCA AACCTTCGCC
CTGACCCTGC CGGGCGTCGA CCGAACCATG TCCTTCGTGG ACTTTTTGAA AGACATGAAC
ATGTCCTTTC ACAACGAGGA TCCGGATTTC TACGTCATCC CCGTAAGCCG GGAACTGGTG
TCCCAGTATC TGCTGCTCTA CGACTCCGAC GACATGGATG AATTCATCAC CCCGGAATAC
GATCAGGCCC GCATCCTGAT CCGCATCTCC GAGCACAGCT CCGCAGGCCA GGCCGAACTC
ATTGACTCCC TGCGCGCCTT CATCGACCAG CACGAACACG ATGGCCTGCA AATCCGGGTC
ACCGGCCGGG CCGTACAGGA CGTGAACACC ATCGACGCCC TGGTCCAGGG ACAGGTGGAA
AGTCTGGCCC TGGCCGCCGC CGTGATCACG TTCATCATGT TCCTGGCCCT GCGCTCGCTT
GTCACAGGGG CCTTAAGCCT GATCCCTAAT GCATTTCCGA TCATTCTCAA CTTCGGGATC
ATGGGCCTGC TCGGCATCCC CCTGAACACC TCCACGGCCC TGATCTCCGT GGTAGCCTTG
GGCATCGCCG TGGACGACAC CATCCATTTC TTGACCGAGT ACAATCGAAA ACGCGCCGAG
AACCTGCCCA TGCGGGAGGC TCTTCAACAA TCCATCCTGG AAAAGGGTAC GGCCATTACC
GCCTCGTCGC TGATCCTGGT CATCGGCTTC GGCGTGCTTC TTTTCAGCAG CTTCGTGCCT
ACCATGAGCT TCGGGGGCTT AAGCGCCGTG ATCATGATCA CGGCCTTGAT AGGCGACCTG
ATCGTTCTGC CGGCGGCCAT GCTTTCCTTT GACGGCAAGA GCGCGTGA
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| Protein sequence | MKHLASLVTR FPILCLVLSL CLAAPFLIQL PRIQTVDNVD YFTVEDDPDV AFYQSIKDTF
GEDEFFVIAF SNPELFTPPI LRMIAAITQE LETIPEVREV QSLANVDYIH GEEEYFEVRP
FLERIPEDAP GLAVLRKQAL GNPLYVGNLV SADGETTALV VFPTAHEAGD GSFRKRLIEQ
TETVLAKHEA LAGRFHLAGW TMTNFSLSQY MKSDVAVFIP VTYLFITLTI WLFFRNVRLT
LLALANISMC TGATMGLFPL LGITLNNVTT VVPPLVMALA LADSVHIFAH LDKKLLDDAP
SPAKAMESIL HRVITPCFLT SLTTAVGFIS LVVSDIPPIK EFGYVASAGM IFEFLFSFLL
LPPLMLMCRP DAIYTHQRKD IGMGAFLGRL STLVQTHARP ITIFIAFLTL GALWAASTIR
VETNLLEYFK PSSPLRQELS YIEPRLSGVG TVDISVKAGE RDALRDPDKL AVIDRLQTFA
LTLPGVDRTM SFVDFLKDMN MSFHNEDPDF YVIPVSRELV SQYLLLYDSD DMDEFITPEY
DQARILIRIS EHSSAGQAEL IDSLRAFIDQ HEHDGLQIRV TGRAVQDVNT IDALVQGQVE
SLALAAAVIT FIMFLALRSL VTGALSLIPN AFPIILNFGI MGLLGIPLNT STALISVVAL
GIAVDDTIHF LTEYNRKRAE NLPMREALQQ SILEKGTAIT ASSLILVIGF GVLLFSSFVP
TMSFGGLSAV IMITALIGDL IVLPAAMLSF DGKSA
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