| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2224 |
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| Symbol | |
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| ID | 8377898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2559837 |
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| End bp | 2562491 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645001445 |
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| Product | PEP-CTERM system TPR-repeat lipoprotein |
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| Protein accession | YP_003158722 |
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| Protein GI | 256829994 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGAT GTACTGTATT CGCGGTTGCG CTCATGCTCT GCGTCGCGCT TGCTGGTTGC
AAGGGACATA CCAGCGAATC CCTCAACGCC GAAGGGGAGG CGCTTTTCAA GCAAGGCAAC
TATAACGGGG CGATCGTCCA TTACAAGAAC GCCTTGGAGA AGGACCCCAA TTTTGTCGCG
GCGCGATACA ACCTCGGTTT GGCTTATATC GAAACCGGCA AGATGGACCA GGCCGAGCGG
GAATTTCAGA AAGTTCTGCT GCAGAACCCC TATGACGGCC GAGTCAATTT TCAGCTGGGC
CGGATCGCCA ATTTCCAGAA CAAGCCTGCC GTGGCCGTGC CCTTGATCAT GGCCTATTTG
CAGGAACATC CGGATGATGC CGCCGCCCTG GAGCAGCTCG CCATTTCGGC CACGATTTCC
GGAGATCCCG CCAGTGCCAA GGGACATCTG GAAAAGGCGC TGGCCGTCGA GCCTGACCGG
ATTTCGGCCA AGCTGGGTCT TGTCCAGATT TTTATGATTC AGGGGGACAG GGCCGAGGCT
CGCAAAATGC TCGACAAACT GTTGGCTCAA GATCCCGAGA ACAGATCGGG TCTGCACGCG
CTGGCGCAGC TTGAGGCCCA GGAAAAGGAT CCCGAAGCCA TGCTGGATGC GTATTCCCGC
ATCTCTTCCA TCTACCCCTC CGATTTGTTT GCCCGCTACA AGCAAGGCAG TCTCCTCATG
AACAAAGGCG AAGGGGAGAA GGTCAGGGTT TCGGCCGAGG CCATGCTGAG TGAGTATCCC
GACAGCGCCG AAGGGCATCG GCTCATGGGG CTGTATCTCT TCCGTGAGGG TAAATTCGAC
GAGGCCGCGA CGTACCTCAG CAAATCCCTG CGCATCAAGC CGGATCTGGA AACATACTAC
CTGCTTGGTC TTGTCTACTA CAACCTCGAC AATCTGGAAC TGGCGGTGAC CCAATTCCAG
ACCGTGCTCG ATTACAGTCC CGGCTTCGTG CAGGCCAGGA TCATGCAGGG TGAGATATTT
CTGCGCCAGG GCCGGGGACC GGAAGCGATG GTCGCGGCTG AAAAACTGAT CGAAGGCAGT
CCGGAGGATT TTCGCGGCCA TGTCCTCAAA GGCGATGCCC TGCTGATGCA GGGGAAGGCC
CATGAGGCGC TGGCTGAATT CAAACAGGGC ATTGGATTGG CGCCATCTCA TTATGGCTTG
TTGCTCAAGA CGGGCCTGCT CAAGCTCTCC TTGGGGGACC TGAGCGGAGA GGACGACATG
GTCAGCGCGA TCAAAATTTC GCCCGAGGGC GTCGATGCGC GCATGGCCCT GCACTCGTAT
TATTTCAGAA ATGGCCGCAT GGACGAGGCC GTGGCCGTGC TAAGCGAAGG CCTGAATGGA
AGCAAAAATG ACGCGGTGCT CTATAACGCC TTGGCCAAGG CGTCATTGGG ACGCAAGAAC
GCCAAGGAGG CCGAGGAATA TCTGGCCAAG GCACGTGGCG CGGACCCGGC TTTCCTACAG
ACCTATTATC ACGGCGCCAT CGCCAAACTC TTCCAGAACA AGCTCGACGA GGCCGTGACG
CAGTATGATC TGGCCCTGGG CTTCGCCCCG AACGACGTGC GGGCCCTCAT TGCCTCGGCG
GCGGTCCTTG AGAAGCAGGG GAAGCTCGAC GAGGCCCGGG TCCGGCTGGA AAAGGCTCGT
TCCACCAAGG ACACCGGGGC GATCCTGATG CTTTCGAGTT TCCTGCAGCG AAACGGGAAA
AGCGACGAGG CCCTGGCGGT TCTGGACCAG GAACGAACGA AGCAACCCGA GAATATGGTC
ATTGTCCAGG GCATGGCCAA GCTGCATGTC GCGCGCAAGG AAATGGACAA GGCCATGGCC
TTATACAGCC GGCTTGAGCA AATCGACCCC TATGCCGGGA CGGTGGAGCG GATGAGAGCG
TGGATGGCCG CCGGAGATCT GGACAAGGCC GAGGAAAGCG CCCGGCGTCT GATGCAGTTG
AAGCCGGACA AGGGGCAGTC CTGCCTGCCG TTGGCCAGTA TTCTTGAGAT GCGCCAGAAC
CGGGCAGAAG CCGAAAAAGT ACTGCTCAAA GGGTGGGAGC TGGAGCCCTC GGACGATCAG
GTCGGCGTCG TGCTGGGCGA GTTTCAGCTG CGTGGCCGGG AGACCAAGAA GGCGCTCGCC
ACCTTTGATC AGGTTTTGGC GCATTCACCC ACCAACGCCC CGGCCCTGAC CGGGAAGGGC
ATGGCCTTGC AACTGCTTGG CAGGAACGAC GACGCGGCCA GGATGTATCT CCAGGCCGTC
CAGGCCCGGC ACGACCATGT CCCGGCCTTG AATAATCTGG CCATGATCTG GGCCGATGAC
GAGGCGAAAA GCGCCCAGGC CGTGAATCTG GCCATGGCAG CCTTTGTGCT TGCGAACAGC
GACCCCGCCG TCATCGACAC GCTCGGCTAC GCCCTGATTC GTAACAATCG TCCAGAGGAG
GCCCTGGGCG TACTCGCGCG GGCCTTGACC CTTGCTCCAG GCAATCCCGG AATCCTTTAT
CATCAGGGCC TGGCCCAGGC CGAGCTGGGC CGCACGGCCG AAGCCAGGGC AACGCTTGAA
ACGGCCTTGG CTTCGGCCGA TTTCGCTGAA CGCGAGGACG CCGAAAAGCT TCTGCGCGCC
TTGAGCGGGA AGTAG
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| Protein sequence | MIRCTVFAVA LMLCVALAGC KGHTSESLNA EGEALFKQGN YNGAIVHYKN ALEKDPNFVA
ARYNLGLAYI ETGKMDQAER EFQKVLLQNP YDGRVNFQLG RIANFQNKPA VAVPLIMAYL
QEHPDDAAAL EQLAISATIS GDPASAKGHL EKALAVEPDR ISAKLGLVQI FMIQGDRAEA
RKMLDKLLAQ DPENRSGLHA LAQLEAQEKD PEAMLDAYSR ISSIYPSDLF ARYKQGSLLM
NKGEGEKVRV SAEAMLSEYP DSAEGHRLMG LYLFREGKFD EAATYLSKSL RIKPDLETYY
LLGLVYYNLD NLELAVTQFQ TVLDYSPGFV QARIMQGEIF LRQGRGPEAM VAAEKLIEGS
PEDFRGHVLK GDALLMQGKA HEALAEFKQG IGLAPSHYGL LLKTGLLKLS LGDLSGEDDM
VSAIKISPEG VDARMALHSY YFRNGRMDEA VAVLSEGLNG SKNDAVLYNA LAKASLGRKN
AKEAEEYLAK ARGADPAFLQ TYYHGAIAKL FQNKLDEAVT QYDLALGFAP NDVRALIASA
AVLEKQGKLD EARVRLEKAR STKDTGAILM LSSFLQRNGK SDEALAVLDQ ERTKQPENMV
IVQGMAKLHV ARKEMDKAMA LYSRLEQIDP YAGTVERMRA WMAAGDLDKA EESARRLMQL
KPDKGQSCLP LASILEMRQN RAEAEKVLLK GWELEPSDDQ VGVVLGEFQL RGRETKKALA
TFDQVLAHSP TNAPALTGKG MALQLLGRND DAARMYLQAV QARHDHVPAL NNLAMIWADD
EAKSAQAVNL AMAAFVLANS DPAVIDTLGY ALIRNNRPEE ALGVLARALT LAPGNPGILY
HQGLAQAELG RTAEARATLE TALASADFAE REDAEKLLRA LSGK
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