| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2215 |
|---|
| Symbol | |
|---|
| ID | 8377889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2549557 |
|---|
| End bp | 2550795 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645001436 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_003158713 |
|---|
| Protein GI | 256829985 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTC CGTATTTGCG CATGCTGCCG CCGAGCGCCT CGCCGCTGCG TCCCGCCGAT
ATCGCGGCCG GAATCAGGGC GTGGGTGACC GGCCAAGGGG CGCAGTCCCT GCGGCGCGAA
ATCAAACGGC GGTTCGGGGC GCGGCACGTC TTTTTCGCGA CTTCCGGCCG GGCCGGGCTT
TCCGCTTTGC TGCGGGCCAT GCGCACGCTT TGCCCGCAAC GGGACCAGGT GCTCCTGCCC
GCCTTCACCT CCTTTTCCGT GCCGTCGGCC GTGGTCAATG CCGGGCTCAA GGTCGGTCTT
TACGATGTCA GTCCCCGGAC CCTGGCCCCG GACATGGCCA GCCTCGAAAA GGCCATGAAC
CGCAAGACCT TGTGCGTCGT GGCCTGTCAT CTTTTCGGAT ATCCGCTGGA TCTTGAGCCG
CTGCGTGAAC TGTGCCGCGT TCACGGCGCA GCCCTTTTGG ACGACGCCGC GCAGGCCATG
GGCGCGCGGG CCGGGACGGA ACTGGCCGGG ACCATGGGTG ATGCGGGGCT TTTCAGCCTG
AGCCGGGGCA AGAACATCAC CGCCGTGGAC GGAGGGATCG TCCTCACCGA CCGCGAGGAC
CTGGCGGACG CGCTTAAGGT TATGCCTGAG CTTTTTACGG AGGGGAGTAG GCTCCGGCCC
GTTCAAAGCC TGGGCCTAGC CCTGGCGCTC ATGGCCATGC TTCACCCCCG GGCGTACTGG
CTGCCCGCAT CCCTGCCGTT TCTGGGGATC GGGGCCTCTG TTTTCGATCC GGATTTTCGC
CTGGAATCTT TGGACGCACT GCGGGCAGGC ATAGCCCGCA GCGTCCTGGA CCGGCTGGAC
GACTTGAATG CCGCCCGCCG CAGGACTGCC GCCACCCTGC ACGCAGGGTT GCAGGGGGTG
CCTGGCGTGC GCGTCGTGCA GCCAGCCGCC GGGACCGTGC CGGTGTATCT GCGCCTGCCG
CTTCTGCCCC TTTCAGGTGC CTGGCCGGGA GGAGTCGCGC CAGAGGCGCA GGCGCTCGGC
GTAGTCCGTT CCTATCCCTT GGCCCTGCAC CGCATCCCGG GGCTGGCGCC GTTTCTGGTC
TCGGTCGGCG AATATCCCGG CGCCTCGATG CTGGCCGCAA ATCTCCTGAC CCTGCCCACC
CATGGCCATG TGCGCGGTGA CGACATCAGG GCCATTGTGC GGGCCTTCCA GGATCTGCCT
GCAAAGAGAT GCGCACGCGT CAAGGAGGTC GCGGCATGA
|
|---|
| Protein sequence | MSGPYLRMLP PSASPLRPAD IAAGIRAWVT GQGAQSLRRE IKRRFGARHV FFATSGRAGL
SALLRAMRTL CPQRDQVLLP AFTSFSVPSA VVNAGLKVGL YDVSPRTLAP DMASLEKAMN
RKTLCVVACH LFGYPLDLEP LRELCRVHGA ALLDDAAQAM GARAGTELAG TMGDAGLFSL
SRGKNITAVD GGIVLTDRED LADALKVMPE LFTEGSRLRP VQSLGLALAL MAMLHPRAYW
LPASLPFLGI GASVFDPDFR LESLDALRAG IARSVLDRLD DLNAARRRTA ATLHAGLQGV
PGVRVVQPAA GTVPVYLRLP LLPLSGAWPG GVAPEAQALG VVRSYPLALH RIPGLAPFLV
SVGEYPGASM LAANLLTLPT HGHVRGDDIR AIVRAFQDLP AKRCARVKEV AA
|
|---|
| |