Gene Dbac_2194 details

Gene Information

• Locus tag: Dbac_2194
• ID: 8377868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: -
• Start bp: 2521580
• End bp: 2523409
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 645001415
• Product: histidine kinase
• Protein accession: YP_003158692
• Protein GI: 256829964
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGTTG CTATGCCGAC GTATTGCGAA ACAGTTACGA TCTCTGGTTT TTACATGTTT 
GATATAAAGA AGAATTATAA TGAGAGTGAT GGCATGACAA AACGGTATGC GGAGCAAGAT 
CACCTCTTTG AGTTGAACAG AGGGGGGACG TTGGGCCGGG AGGAGTGTTT CTCCCACCGG 
CTTCACGGGC TTGACGATTC CAATGATGTT CGGGTGCTGA ATGAACTCAA AGCCAAGCAG 
GGCGCGTTGT TGATACAGAA CGAAGAACTG CGCAGGGCTT TGGACAACTC GGAAAAGAAA 
TTAGCGATCT ATTCGGATTT TTATGATTTT TCTCCCTATG GCTTGGTCTG CCTGGACGAA 
CAGGGGCGCG TTTGGGAGGC AAACCCTTGG ACAATCGGTC AATTGGGCGT GGAAAGAGAC 
GCGCTGCTTG GCTCGTCTTT TGGGCAGCGT GTCGCTTCTC AGGACATGGA AAAATTCAGG 
GTGCATCTTG ATCTTGTTTT CAAAACAGGA GAGCGGCAGA GTTGCGAGTT GATGCTCAAG 
CGGAAGAACA TGCAGGATCT CCGGGTCAAA ATAGACAGCA TCAAATCTTC AAATAGTGGC 
TGTGCTGATT TGTGTATGTC TGCTTTGGCA GATATTACTG GCATGTATAA TCCAAAACTC 
TTAAATAACT TTTCTTCTTC TGATGTGGAT GAAATTTTTC ATTCAAATAC AGATTTTACT 
GTAGAAAGTG AAGATAAATT TCAAATATTA TTACAGCAGT TTCACGCGAT ATTAAGTGAT 
ATCAGTGGTA CTGTAATTAT TGTTTCGCCA GATATGAAGG TTTTATGGTC GAACATAGTC 
AACGATTTTG GAATTAATTC GAATATATCA GAAAGTGTTT TAAAGTATTG CAATGATTTT 
GTGAGTAATT GTTCAGTGCT CTATGAAAAA TCTGTTATCA TTGATTGCTT TAATACCGGA 
GAAAAAAAAT CGTGCATCGT TACGCATGGC GAATCTGTTT TGGATATACG GGCCTTTCCC 
GTCAAGGAAA GTGGAAGTGT GAGCAGTGTG CTGCTGCTGG TGTGCGATGT CACGGGAAAA 
ATGGCGATTC AGGAGGATGC GCAGTATGCC TGCCATCTTT TGTCACTCGG GGAACTGGCT 
GCGAGCGTCG CGCATGAGAT AAACAATCCG GTCAACGGCA TCATCAATTA CGGGCAAATA 
CTGGTCAACG AATGCGGCGC AGAGAGCATG GAGCGTGATC TGGGAGTGCG CATCCTCAAA 
GAGGGCGAGC GCATCGGCCG CCTCGTCAAG TCCCTCCTTT CCTACGCGCA CGAAAGGCGA 
AAAGAGAAAA GAGCGACACA GGTCGCGACT ATTCTTGAGG AAACCCTGGC CCTGACCCAG 
GCCCAGATTC GCAAGGACGG CATTCAGCTT GTTCTCGACT TCCCTGAAAG TCTCCCCAAG 
GTCACGGCAA ATCTGCAGCA GGTTCAGCAG GGGTTCATAA ACATCATCAG CAATGCGCGC 
TATGCATTGA ATGAAAAGTA TCCGGGGTGG CATAAGAACA AATGTCTCGC GATCTCCGGC 
GAATCCGTCT TGGTCGATGG CTGTCCTTTT GTACGGGTGG CGTTTCTGGA TCAGGGGGGA 
GGGATATCGG TCGAAAAGCT CTCGTTTTTG ACCAAGCCTT TTTTCTCCAC CAAACCTTTT 
GGCAAGGGGA CCGGGCTGGG GCTGAGCATT ACGCAGAAGA TCATCGATGA TCACGGCGGG 
CATCTGCGGT TTGAGAGTGA AGAGGGGGAG TTTACCCGCG TTATAATTGA TTTGCCGGTT 
CATCAAAAAG ATGAAGGAAC ATGTAAATGA 

 

Protein sequence

MIVAMPTYCE TVTISGFYMF DIKKNYNESD GMTKRYAEQD HLFELNRGGT LGREECFSHR 
LHGLDDSNDV RVLNELKAKQ GALLIQNEEL RRALDNSEKK LAIYSDFYDF SPYGLVCLDE 
QGRVWEANPW TIGQLGVERD ALLGSSFGQR VASQDMEKFR VHLDLVFKTG ERQSCELMLK 
RKNMQDLRVK IDSIKSSNSG CADLCMSALA DITGMYNPKL LNNFSSSDVD EIFHSNTDFT 
VESEDKFQIL LQQFHAILSD ISGTVIIVSP DMKVLWSNIV NDFGINSNIS ESVLKYCNDF 
VSNCSVLYEK SVIIDCFNTG EKKSCIVTHG ESVLDIRAFP VKESGSVSSV LLLVCDVTGK 
MAIQEDAQYA CHLLSLGELA ASVAHEINNP VNGIINYGQI LVNECGAESM ERDLGVRILK 
EGERIGRLVK SLLSYAHERR KEKRATQVAT ILEETLALTQ AQIRKDGIQL VLDFPESLPK 
VTANLQQVQQ GFINIISNAR YALNEKYPGW HKNKCLAISG ESVLVDGCPF VRVAFLDQGG 
GISVEKLSFL TKPFFSTKPF GKGTGLGLSI TQKIIDDHGG HLRFESEEGE FTRVIIDLPV 
HQKDEGTCK