Gene Dbac_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2187 
Symbol 
ID8377862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2505265 
End bp2507382 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content57% 
IMG OID645001410 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003158687 
Protein GI256829959 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACA AAACAGGTCA ACCCGAAAAT CCGGACCTGC TTCGCCGCAA AGCTGAAGAA 
ATCAGCCGGA AGAACGAAGC AGGTTCGCCG GAGAGCCTCG CCACCGACTC CGTCGAAGAG
CCGTCATGGA TAGTCCATGA ACTGCGCGTT CACCAAATCG AGCTTGAGAT GCAAAATGAG
GAATTGTGCA GGACACACGC AGAACTCGAA GAAGAACACC AGCAGTACCT GGATCTCTAC
GACTTTGCTC CGGTGGGCTA TTGCACTCTT TCGGAACAGG GACAGATCAC GGCAACAAAT
CTCACTGCCA CGGCAATGCT CGGCATACCC CGAGACAACC TCATCGGACA GCAGATAACC
AGCTTCATCT GTGATGATGA CCAGCACACC TTCACCCGCG AAATGAAAGA ACTGTTTGCG
ACCAGGGTAG CGCGAAGCTG CGAACTGCGC ATGAAAAAAA CAGACGGTGT CCAGTTCTGG
GCCTGCCTGG AATTCGTTTT AAAGCCTTGC GATGACTGCC CCGTGTGCCG CGTCGTCATA
AGCGACATCA ACGACCGTAA ACAGGCCGAG ATTGCGCTGA CCGAGAGCGA ACTGCATTTC
AGAAACCTGT CCAACAGCGG CCAGGCATTG ATCTGGACTT CCGGAGAAGA CACGCTGTGC
GATTATTTCA ATGAGCCCTG GCTCGACTTC ACCGGCCGCA CCCTGGAACA GGAGCTCGGC
AACGGCTGGG TCGAAGGGGT GCATGCGGAG GACCTTGACC GTTGCATTGA CACCTATGTG
ACGGCCTTTG CCCGACGCGA ACCGTTCAAC ATGGAGTACC GGCTGCGCCA TGTCAGCGGC
GAATATCGCT GGCTGGTGGA TCAGGGCACG CCACGCTTCA ATTCACAGGG CGCATTCGTC
GGGTACATCG GTCATTGCCT GGACATCACC CCCCGCAAGC AGATGGAAGT GGAGCTCGTG
GCCGCGAAAA ATGCGGCTGA ATCGGCGAAC AAGGCCAAGA GCGCATTTCT GGCCAACATG
AGTCACGAAA TCAGGACACC TTTAAACGGG TTGCTGGGCA TGATGCAGCT CCTTGAAACG
ACGGATACAA GCGACGAACA GCAGATGTAC ATCGAAATGG CCATCCGCTC CGGGGGCAGA
CTCACCCGCC TTTTAAGCGA CATCCTGGAC CTGTCCCGCA TCGAGGCAGG CCGAATGCCC
TTGAGCGAGG AACCGTTCAA TCTGTCCGAA ACATTTTCCG CCGTCACCGA CAGTTTTGGC
CCGGTGAGCA TTCAAAAGAG ACTGCCTGTC CGCATCGACG TCGCGCCGGA TGTGCCCAAG
GAAGTGTTCG GGGATGAGGT CCGCGTCCGT CAGGTGCTGT TCAATCTTGT CGGCAATGCC
ATGAAATTTA CCGACCAGGG AGAGGTCCGG ATCGAGGTAT CGACCCTGCT TCCCCTGCCG
CCGGATACGG TCCGCGTGCT GTTTTGCGTT ACCGACACGG GCGCGGGAAT GAGCGACACG
ACGCTTAAGA CTTTGGGGAA CCCTTTCACC CAGGCCAGTG AAGGTTTCAC CCGCGAGCAT
CAGGGCGCAG GCCTTGGGCT TTCCATATGC AAGCGTCTTG TTGCCGCCAT GGGAGGCACG
CTGACCTTTG AGAGCACCTT GGGAGCTGGA ACCGCCGCGT ACCTGATGCT TCCTTTCAGG
TGGCGGGCGT ATTCCATCCT CCCGGATCAG CCAGGCCTCG ACTCCGCCGC GCCATCGCTA
CGCATTCTGC TCGTCGAAGA CGACGAAATA AGCCGCGTGG CGGAAACGCA GCTGCTCAAA
AAAATGGGAC ACACCGTGCA AACGGCCGGC AACGGGATTG AAGCACTGGA AAGCATGCGA
CGCAGCACCT TTGATTGCGT ACTGATGGAT GTGCAGATGG AAGTCATGGA TGGCCTGGAA
GCCACCAAAA ACATCAGGAC GGACGTCTCC AAATTCTTTG ACCCCAAAAT TCCCATCGTC
GCCATGACGG CGTATGCCAT GCGTGGCGAT CGCGAACGGT TCATCATGGC GGGCATGGAT
GACTACATAG CAAAACCGTT CGACCGTAAT AAGTTGGAGC AGGTGCTGGG CGGCATTGAC
GTCAAAAACA GGACATGA
 
Protein sequence
MKNKTGQPEN PDLLRRKAEE ISRKNEAGSP ESLATDSVEE PSWIVHELRV HQIELEMQNE 
ELCRTHAELE EEHQQYLDLY DFAPVGYCTL SEQGQITATN LTATAMLGIP RDNLIGQQIT
SFICDDDQHT FTREMKELFA TRVARSCELR MKKTDGVQFW ACLEFVLKPC DDCPVCRVVI
SDINDRKQAE IALTESELHF RNLSNSGQAL IWTSGEDTLC DYFNEPWLDF TGRTLEQELG
NGWVEGVHAE DLDRCIDTYV TAFARREPFN MEYRLRHVSG EYRWLVDQGT PRFNSQGAFV
GYIGHCLDIT PRKQMEVELV AAKNAAESAN KAKSAFLANM SHEIRTPLNG LLGMMQLLET
TDTSDEQQMY IEMAIRSGGR LTRLLSDILD LSRIEAGRMP LSEEPFNLSE TFSAVTDSFG
PVSIQKRLPV RIDVAPDVPK EVFGDEVRVR QVLFNLVGNA MKFTDQGEVR IEVSTLLPLP
PDTVRVLFCV TDTGAGMSDT TLKTLGNPFT QASEGFTREH QGAGLGLSIC KRLVAAMGGT
LTFESTLGAG TAAYLMLPFR WRAYSILPDQ PGLDSAAPSL RILLVEDDEI SRVAETQLLK
KMGHTVQTAG NGIEALESMR RSTFDCVLMD VQMEVMDGLE ATKNIRTDVS KFFDPKIPIV
AMTAYAMRGD RERFIMAGMD DYIAKPFDRN KLEQVLGGID VKNRT