| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2178 |
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| Symbol | |
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| ID | 8377853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2494001 |
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| End bp | 2495440 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645001401 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003158678 |
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| Protein GI | 256829950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAG ATTCCCGCAT GCGAAGGGGC GCGCTCCTCT GTATTGCCGC CATGATTCTT
CTGTCCGGCT GCGCCTCCAT GGCTCCACGT TATGAAGCGC CCGCCCTTCC GGTGGCTCCC
ATATACGCCC CGGACAACGC GCAGGACGGA GCTTCGGCAT CGGCCATCGG CTGGCGCGAC
TATTTCATCG ACCCGTCATT GCAGAACCTG ATCCAGCGCG CGCTGGACAA CAACCGCGAC
CTGCGAACCG CAGTGCTGCG GGTCGAGGAA GCGCGCGCCG TCCATGGCAT CCAGCGCTCG
GAGCTTTTTC CGACTGTCGG AATTCAGGCT GGCGAAGACC GTTCACGGAC TCCGGCCGAT
CTGAACATGA CCGGCAAGAC GCTTTTCGCC AGCCAGTTTC AAGCCGGGCT GGGCATGGCC
AGCTGGGAGC TTGATTTCTG GGGGCGCGTA CGCAGCCTGC AGGACGCCGC GCTGGAAAAC
TTTCTGGCCA CCGATGCCGC TCGTCGTGCA GCCGCCCTCG GCCTGGTCGC GCAGGTGGCC
GACAGCTATT TCAGGTTGCT TGAATTTGAT GAGCGCATCG CATTGGCGCA TCAGACCATC
GCCAGCCGGA CAGAGAGTTT CCGCATCTTC ACGCGTCGCG TGGAGGTGGG CTCGACGTCG
CGGTTCAGCC TGACCCAGGT GCAAACGCTA TTGACACAGG CACAAGCGCT CGGAGCGCAA
CTGGAACAGG AACGTGAAGC ACAGTTCCAT GCACTGACGC TCCTGGTCGG GGCGACCATT
GATCCGCCAC CCGAACAGGA TCAGCCAGGC GAACGAAACA CCCTTGTCCG AGTGCGCCCT
GGCCTGCCTT CCGACCTGCT CTTCCAGCGC CCCGACATCG TTGCCGCCGA ACATCGGTTG
AAAGCCGCCA ATGCCAACAT CGGGGCGGCG CGGGCGGCTT TTTTCCCACG CATTGCCCTG
ACCGGTTCCC TCGGTACGGC AAGCGCCGAA CTCGGCGATC TGTTTGCCGC CGGCAGTCTG
GCCTGGATTT TCTCCCCGAG CATCTCGCTG CCCATCTTCG ACGGCGGGCT CAGGTCCGCC
AACCTGAGCC TCGCCGAAAT ACGTCTCGAC ATGAACGTGG CCAACTACGA GAAAACCGTA
CAGGCCGCCT TCCGCGATGT CGCCGACGCA CTTTCGGCTC GTCACTGGCT GGCCCGGCAG
GTCTCCATCG CCCAGGCGGC GCTGGAGACG CAGACCGAGC GGGCGCGGCT CTCGCAGCTA
CGCTACGACA ACGGCGCCTC GGCTTATCTG GAGGTGCTCG ACGCCCAGCG CGATCTGCTC
GACACCGAGC AACGGCTTGT GCAGATGCGC CGGGCACTGC TGACGAGCCA CGTCAGCCTG
TATGCCGCGT TGGGTGGCGG ATCCATGGAT TTTGTTTCCA CCCCCGGCAC GTACTTCTAA
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| Protein sequence | MNTDSRMRRG ALLCIAAMIL LSGCASMAPR YEAPALPVAP IYAPDNAQDG ASASAIGWRD
YFIDPSLQNL IQRALDNNRD LRTAVLRVEE ARAVHGIQRS ELFPTVGIQA GEDRSRTPAD
LNMTGKTLFA SQFQAGLGMA SWELDFWGRV RSLQDAALEN FLATDAARRA AALGLVAQVA
DSYFRLLEFD ERIALAHQTI ASRTESFRIF TRRVEVGSTS RFSLTQVQTL LTQAQALGAQ
LEQEREAQFH ALTLLVGATI DPPPEQDQPG ERNTLVRVRP GLPSDLLFQR PDIVAAEHRL
KAANANIGAA RAAFFPRIAL TGSLGTASAE LGDLFAAGSL AWIFSPSISL PIFDGGLRSA
NLSLAEIRLD MNVANYEKTV QAAFRDVADA LSARHWLARQ VSIAQAALET QTERARLSQL
RYDNGASAYL EVLDAQRDLL DTEQRLVQMR RALLTSHVSL YAALGGGSMD FVSTPGTYF
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