| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2163 |
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| Symbol | |
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| ID | 8377838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2481773 |
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| End bp | 2483500 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645001386 |
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| Product | sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family |
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| Protein accession | YP_003158663 |
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| Protein GI | 256829935 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGC CCAAAAATCG GAAAAAATCC GCTCCCGGGC TGACGCAGCC TACGGACAAA
CCGGCGCGCG GCGATACTGC CGGCACTCGT TCCCTGCTGC CCGAAATCGA GATGAAGCGG
CTCGTGCAAG AGCTTGAGGT CCACCAGGTC GAACTGGAGA TGCAGAACGA AGAACTGCGT
CAGACCCAAG AAGCGCTGGA GACCTCGCGC AATGCCTTTG CCGAACTTTA TGACTTCGCT
CCTGCGGGCT ATTTTTCCTT TGACCCGCAA GGATTGGTGC GCAGCGTCAA CCTTCTTGGC
GCCCAGTTGC TTGGCCTTGA ACGGGAGCAC CTGCTGGGCA AGCCCATGAG CCGGTGGATC
CCCGACGCGG ACGGACGGAA GGTTTTCTCT AAGCACTGCG CGGATGTTCT GCGCAGAGAG
GGAAACGATA TCTGCGAAAT CTGGCTGCAG AGAGCTAACG GAATGAAATT CCACGCCCGT
CTGCGAAGCA TCGCCAAGGA GTCGGTCGAA GGAACGCACG GCGCCATCCG GTCCATGATC
GTTGACGTGA CCGAAGAGGA GAAGCTGAAG ATTGCTCTGC AAAACGCACA TGGCGAGCTT
GAGCAGAAGG TCATGGAGCG AACACGTGAA CTGCTCCTGA CCAACAAGCG TCTGGTGCTG
GAAATCGGCG TGCGCAAAGA CACGGAAGAA TCGCTGCGCA TGGCGATCAA GGAAATCAAG
CAGCTGAAAG ACCGCCTCCA GGCCGAGAAC ATCTACCTGC AGCACGAGGC TGCCCAAAAA
TTCAACTTCG GCGAAATCAT CGGCCAGAGC AGCGCCATCG CGCATGTTTT CGACAAGATC
GAGCAGATCG CATCCCAGAA TACGACCGTG CTTCTCCAAG GCGAGACAGG GTGCGGCAAG
GGGGTCGTAG CGCGGGCCAT CCATGCCCGG AGTGCCCGCA AGGATCGGGC GATGGTCACC
ATCAACTGCA CGGCGTTGCC GGCAAACCTC ATTGAAAGCG AACTCTTCGG GCGCGAAAAA
GGAGCCTTTA CCGGAGCCAG CGCCCGGCAG ATGGGACGCT TCGAGCTTGC CGACGGAGGA
ACCATCTTTC TGGATGAAAT CGGCGAGATG CCGATGGAAC TGCAATGCAA GCTCTTGCGG
GTGATTCAGG ACGGCGAGTT CGAGCGTCTG GGGAGCCCGC GTACCATCAA GGTCGACGTG
CGGATCATCG CGGCCAGCAA CCGCAAACTG GAAGAAGAAA TCAAAAATGG CAGTTTCCGC
GAGGACCTCT ATTACCGGCT CAATGTCTTC CCCATCACCA TCCCGCCGCT GAGGGCGCGC
AAGGACGACA TCCGCCTTCT CGTCAATTTT TTCGTCGCCA AGTTCAACAA GAAGATCGGC
AAGAAAATTG AAACCATTCC CAAGGAAGCC CTCGAAGCGC TGGAAAATTA CGACTGGCCC
GGCAACGTGC GGGAACTGGA AAGCGTGATC GAACGGGCGA TAATAATCAG TAAAGGTCCG
TCATTGCAGA TTCTGGATCA ATTCAATACG TCGCCCAAAC CCAGCGAAAC GTCCGGCGCG
GACGTCAAGG CTCTGGTGGA CCTGGAGCGC GACCACATCA TCCATGTGCT CCAGAAAACA
AATTGGCGCG TCGAAGGGAA AAATGGCGCT GCGGCCATCC TCGACATCAA TCCCAGCACG
CTTCGAGCCC GCATGAGAAA ATTCGGAATC AATCGCAACT CCATATAG
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| Protein sequence | MNTPKNRKKS APGLTQPTDK PARGDTAGTR SLLPEIEMKR LVQELEVHQV ELEMQNEELR
QTQEALETSR NAFAELYDFA PAGYFSFDPQ GLVRSVNLLG AQLLGLEREH LLGKPMSRWI
PDADGRKVFS KHCADVLRRE GNDICEIWLQ RANGMKFHAR LRSIAKESVE GTHGAIRSMI
VDVTEEEKLK IALQNAHGEL EQKVMERTRE LLLTNKRLVL EIGVRKDTEE SLRMAIKEIK
QLKDRLQAEN IYLQHEAAQK FNFGEIIGQS SAIAHVFDKI EQIASQNTTV LLQGETGCGK
GVVARAIHAR SARKDRAMVT INCTALPANL IESELFGREK GAFTGASARQ MGRFELADGG
TIFLDEIGEM PMELQCKLLR VIQDGEFERL GSPRTIKVDV RIIAASNRKL EEEIKNGSFR
EDLYYRLNVF PITIPPLRAR KDDIRLLVNF FVAKFNKKIG KKIETIPKEA LEALENYDWP
GNVRELESVI ERAIIISKGP SLQILDQFNT SPKPSETSGA DVKALVDLER DHIIHVLQKT
NWRVEGKNGA AAILDINPST LRARMRKFGI NRNSI
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