| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2147 |
|---|
| Symbol | |
|---|
| ID | 8377822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2459719 |
|---|
| End bp | 2460714 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645001370 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_003158647 |
|---|
| Protein GI | 256829919 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.226528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAG TTCTGTACGC CATCACGGCC CTAGTTTTTC TGTTCAGCGT GACGACGGCT
TCCGCCGCCG AGTACAAGAA AATGACCATC AGGGCTGCCA CGGCCAACCC CGAAGGCAGC
CTGCACACCA CGGCGATCAA CAAGTTCAAA GAGATCATCG AAAAAGAATC CGGAGGACAG
ATCACCGTCC AGACCTTCTA CGGCGGCTCC ATGGGCGACG AACAGTCCAA TGTCCGCCAG
CTTCGCAGCC AGGAAATCCA CTTGGCCGTC CTGGCCGTGG GCAACCTGAC CCCCTTCGCC
TCCCAGGCCA ACATCTTTTA CCTGCCCTAC ATGTTCCCCA AGATTGACTC GGCCTACCAG
CTGCTGGGCC ATGACGACTT CACCGCCAAG GTCGCCGACA AGGTCGTCGA ACAAAGCGGC
ACCCGGCCCC TGTCCTGGCT CATCGGCGGC TACCGTCACA TCACCAACTC CAAGCACCCC
ATCGCCAAGA TCGACGACCT GCAGGGGCTG AAAATCCGCG TGCCCCCCGT GGCCGTGCAG
CTCGAAGCCT TCAAGTCCTG GGGCGTAGAA CCTCACCCCC TGGCCTGGTC CGAGACCTTC
AATGCCCTGC AGCAGGGTGT CATCGACGGC CAGGAAAACC CGCACACCGT CAACCGCGAC
CAGAAGTTCT GGGAAGTCCA GAAGCACATC ACCGAACTGC ACTACATGCT CTGGGTAGGC
CCCATGCTGG TCAGCGAAGC CTGGTACGCC AAGCTTGACG CCGACACCAA GGCCCTCGTG
GACAAGGCCG CCAAGGAAGC TGCGCAGCAC GAATGGAAGT GGGCAGCAGA ACAGGATGCC
GTGGCCAAGC AACAGTGCAT CGACAAGGGC ATGGAAGTCA CGGAACTGAC CGACGAACCC
GTATGGCAGG AAAAAGCCCG CACCGTATGG CCCCAGTTCG AGGAGCAGGT CGGCGGCAAG
GCCATGATCG ACGAAGCCGT CTCCCTTATG AACTAA
|
|---|
| Protein sequence | MRRVLYAITA LVFLFSVTTA SAAEYKKMTI RAATANPEGS LHTTAINKFK EIIEKESGGQ
ITVQTFYGGS MGDEQSNVRQ LRSQEIHLAV LAVGNLTPFA SQANIFYLPY MFPKIDSAYQ
LLGHDDFTAK VADKVVEQSG TRPLSWLIGG YRHITNSKHP IAKIDDLQGL KIRVPPVAVQ
LEAFKSWGVE PHPLAWSETF NALQQGVIDG QENPHTVNRD QKFWEVQKHI TELHYMLWVG
PMLVSEAWYA KLDADTKALV DKAAKEAAQH EWKWAAEQDA VAKQQCIDKG MEVTELTDEP
VWQEKARTVW PQFEEQVGGK AMIDEAVSLM N
|
|---|
| |