Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2111 |
Symbol | |
ID | 8377786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2420685 |
End bp | 2421557 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645001335 |
Product | diguanylate cyclase |
Protein accession | YP_003158612 |
Protein GI | 256829884 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.672445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA AAGATTCTAA AAAAAATGCT TTCGACAAGA AAGCTTTGCT CGGACAAGTG CTTAAAAAAA ATGAAAAAAT TAAAAAAAAT GTCAAGAAGG CTGCCGGTGA CCTCACCTCG GTAAATAAAG TCCTCAAGCA GGAAAATGTC ACTGTTCAGA TTATGGAGCA GGCCCTCGTT CAGAATAAGG ATGTCGAACA AAAAGTCGCG CAAGCCGCTG ACGATTTGAG AATGGTTAAT GTCAAACTCG CCAATGAAGT GGCCGAGCGG ATGGGTATTG AATCCGAACT CGCCGGTATG AAGATCGACT TGGCCGAAGT GCGTGAGGAT TTGTCAAAAG CGGAAGGGAA CGTGGAAATA GCACAGCAGC TTGCGCTTCA GGACGTACTC ACCGGCCTGC CGAACCGTGC GTCGTTTGAA CAGGGTCTCG CCCACGGGTT GATCCAGGCA AAACGGCACG ATTGGGGACT CGCCGTCCTC TTTATCGATA TCGACAAATT CAAGAATATC AACGACTCTT ATGGTCATGA CATGGGAGAC CATGTGCTGC GGACGCTGGC GAACCGTTTG AAGTCATTTG TGCGAGGCGC AGATATGGTC AGTCGCTGGG GAGGCGATGA ATTTGTGTGT CTGCTGCTTG AAGTCAAGCA GGAATCCGAC GTGACTCGCA TTGCAGAGCA GTTGGTGACT CGGATTGCAG AACCGTGCGA GTTTAACGGA ACGGTTCTTT CCATAACAAG CAGTATCGGT ATTGCCATGT ATCCTGAAGA TGGAAAAACG GTTGATATTC TTTTCAAAAA TGCCGATATG GCGATGTATG AAGCCAAGGG ATCAAAGAAT CGAGTGGTGC TGTTTCGGAC CATCCCTTGT TAA
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Protein sequence | MKSKDSKKNA FDKKALLGQV LKKNEKIKKN VKKAAGDLTS VNKVLKQENV TVQIMEQALV QNKDVEQKVA QAADDLRMVN VKLANEVAER MGIESELAGM KIDLAEVRED LSKAEGNVEI AQQLALQDVL TGLPNRASFE QGLAHGLIQA KRHDWGLAVL FIDIDKFKNI NDSYGHDMGD HVLRTLANRL KSFVRGADMV SRWGGDEFVC LLLEVKQESD VTRIAEQLVT RIAEPCEFNG TVLSITSSIG IAMYPEDGKT VDILFKNADM AMYEAKGSKN RVVLFRTIPC
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