Gene Dbac_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2055 
Symbol 
ID8377730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2362127 
End bp2362681 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID645001280 
Product2'-5' RNA ligase 
Protein accessionYP_003158557 
Protein GI256829829 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.180735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTCT TCATAGGCAT CCCCCTTCCC GGCGAGTACG CGCAAATCAT TGGCAGGATT 
CAAGAGGCGT GGAAAAAGCG TCTGACTTCG AAGATGTCGT GGGTGCGGCC GGATCTGGCT 
CATGTGACGC TCAAGTTTCT GGGCGAAGTG GATGAGGATA GGGTTGTGGC CATTGTCCAG 
GCGATGCGGG AGGCGGCTCG GGGAAGTTTT GAGATGCAGG GGGGCGCGGG CGGTTTTTTT 
CCTCCCAAAG GCGCGCCGCG TGTGATCTGG GTCGGTTTGC GCCAGGGGCG CGAGGAGTGC 
GCGGCGTATT TTGAGGAACT TGATGGAGGA TTGGCTCAGG CCGGGTTTGT GGCCGAGTCG 
AAACCCTTTG CCGCGCACCT GACCGTGGCC CGGGTCAAGG CCGCCATGCG AAGCGACGAT 
TGGTCCGGTC TGCTCGTAGA TTTGAAGAGG GATTGGCCTG CGTTCACGGT GAGTCATGTC 
GTGCTCTGGC AGAGCATCCT GAAGTCCTCC GGGCCGGAGT ATCGAAGAGT GGCGGAAGTG 
GGACTGGAGA AATGA
 
Protein sequence
MRLFIGIPLP GEYAQIIGRI QEAWKKRLTS KMSWVRPDLA HVTLKFLGEV DEDRVVAIVQ 
AMREAARGSF EMQGGAGGFF PPKGAPRVIW VGLRQGREEC AAYFEELDGG LAQAGFVAES 
KPFAAHLTVA RVKAAMRSDD WSGLLVDLKR DWPAFTVSHV VLWQSILKSS GPEYRRVAEV 
GLEK