Gene Dbac_2050 details

Gene Information

• Locus tag: Dbac_2050
• ID: 8377725
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 2357139
• End bp: 2359019
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 645001275
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_003158552
• Protein GI: 256829824
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.874373
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCATCC CAACCGTGCC CGAAACATTC GACATCATTG TCGTGGGCGC CGGCCATGCC 
GGGTGCGAAG CGGCCATGGC GGCCGCGCAC ATGGGCATGC AGACGCTCCT CTTGACCATC 
AACGCCGACC GCATCGGACA CCTGTCCTGC AATCCGGCCA TCGGCGGCCT GGCCAAGGGC 
CACATGGTCA AGGAGATCGA TGCTTTGGGC GGGATGATGG GCAAATGGGC CGATCAGGCC 
GGAATCCAGT TCCGCATACT GAACACCCGC AAGGGCCCGG CCGTGCGCTC CAGCCGCGCC 
CAGATCGACC GGGCCGAATA CGTGAAGGTC GTGCAGCAGG ACATCTTCAC CTGCCCGAAC 
CTCTTCGTGC GCCAGGAGAC CGCCGCGTCG CTGACCGTGG AGGACGGACG CGTCACAGGC 
GTGGTCACCA CCCTGGGCGA GACCATCCCC TGCCGGGCGG CGCTTTTGAC CACGGGCACC 
TTCCTGCAGG GCCTCATTCA TGTCGGCCTC AACAATTTCA GCGGCGGCCG CTACGGCGAT 
CCGGCCAGCA GCGGCCTCTC GCCCCGGCTG CGCGAACTGG GCTTCGAACT GGGGCGCCTC 
AAGACCGGCA CCGTGCCCCG GCTGCTCAAG TCATCCGTCG ACTATTCGGT CATGGAGGAA 
CAGGCCGGCG ACAACCCGCC CCGGCCTTTC AGCTTTGACA GCCCCGGCAT CAGGCTTCAG 
CAGCTGCCCT GCTTCGTGAC CTACACCACG GAGCGCACCC ACGAGATCAT CCGCACCGGG 
TTCGACCGCT CGCCCATGTT CACCGGCGTC ATCAAAGGCA CCGGGGCGCG CTACTGCCCG 
TCCATCGAGG ACAAGATCGC CCGCTTCCCG GAGAAGGATC GGCACCAGAT CTTTGTCGAG 
CCCGAAGGCC TGACCAGCCA CGAGGTCTAC CCCAACGGCA TCCCCACCAG CCTGCCGCTG 
GACATCCAAA AGGCTCTCGT CGCGTCCATC CCCGGCCTGG AAAAAGCCCA GATCATCCGG 
CCGGGCTATG CCATCGAATA CGATTACGTC CCCCCGACGC AGCTCAGACC CACCCTGGAG 
AGCAAGCTCG TGCGCGGGCT GTACATGGCC GGGCAGATCA ACGGCACCTC CGGCTATGAG 
GAAGCGGCCG GGCAGGGCCT GTGGGCGGCC ATCAACGCGG TCCTCGCCCT GCGCGGCGAG 
CCGGAGCTGA TCCTGACCCG CAGCCAGGCC TACATCGCAG TCCTCGTGGA CGATCTGGTC 
ACCAAAGGCA CGCTCGAACC CTACCGCATG TTCACCTCCA GGGCCGAACA CCGCCTTCTG 
CTGCGCGAGG ACAACGCCGA CGAGCGCCTG ACCGCGATCG GCCGCGACCT GGGTCTGGTC 
GATGACAGCC GCTGGCAGCG ATTCACCCGC AAACAGACCG CCGTGAATGA GATCATGGCC 
GGAATGGAAG CGCTGCGCGT GCGCCCCGAT GCCGCGACCA GAAACCTGGT CGAGGCCATG 
GGCGGCACCA TCCCGCAAAA GGCCGTCAGC CTCAAAGAGC TGCTGCGGCA GCCGGAGCTG 
ACCATCGACA TGCTCACGCC GCTGTGGCCG GAGCTTGAAA ATTTTGACGG GGAAGCATTG 
GAAGAGGCAG AAATCAAGAC CAAATACGAA GGCTATCTGC GGCGCCAGCA GGAATTGGTG 
GATCGTTTCG AGAAGATGGA GCAGACCACG CTGCCCGAAG ACATGAACTA TACGGGCATC 
CCCGGCCTCT CCCGCGAAGT CGTGGAAAAA CTGACCCGCG TCCAGCCCCG CACCCTGGGC 
CAGGCCGGAC GCATTTCCGG GATCACGCCC GCGGCTTTGT CCTGCCTGGA AATTCAGCTC 
AAAAAAATCG GCCGGCTCTG A 

 

Protein sequence

MIIPTVPETF DIIVVGAGHA GCEAAMAAAH MGMQTLLLTI NADRIGHLSC NPAIGGLAKG 
HMVKEIDALG GMMGKWADQA GIQFRILNTR KGPAVRSSRA QIDRAEYVKV VQQDIFTCPN 
LFVRQETAAS LTVEDGRVTG VVTTLGETIP CRAALLTTGT FLQGLIHVGL NNFSGGRYGD 
PASSGLSPRL RELGFELGRL KTGTVPRLLK SSVDYSVMEE QAGDNPPRPF SFDSPGIRLQ 
QLPCFVTYTT ERTHEIIRTG FDRSPMFTGV IKGTGARYCP SIEDKIARFP EKDRHQIFVE 
PEGLTSHEVY PNGIPTSLPL DIQKALVASI PGLEKAQIIR PGYAIEYDYV PPTQLRPTLE 
SKLVRGLYMA GQINGTSGYE EAAGQGLWAA INAVLALRGE PELILTRSQA YIAVLVDDLV 
TKGTLEPYRM FTSRAEHRLL LREDNADERL TAIGRDLGLV DDSRWQRFTR KQTAVNEIMA 
GMEALRVRPD AATRNLVEAM GGTIPQKAVS LKELLRQPEL TIDMLTPLWP ELENFDGEAL 
EEAEIKTKYE GYLRRQQELV DRFEKMEQTT LPEDMNYTGI PGLSREVVEK LTRVQPRTLG 
QAGRISGITP AALSCLEIQL KKIGRL