Gene Dbac_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2030 
Symbol 
ID8377705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2331462 
End bp2332874 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content57% 
IMG OID645001255 
ProductPeptidase M23 
Protein accessionYP_003158532 
Protein GI256829804 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA AGAATCGACA TAAATTTCGC CGACCGGCCA ACCTGTCCCT GAAGCGCAAA 
ACCGCGTCTT CTCGGCTGAC CGTGCCTTTT TTCGCCCTCC TGGGGGCGAC ACTCATCGGG
GCCGCCATTT TCTTCAACTT CCTCGCGCCA AACGAAACCC AGTCCAGCAT CGACTGGAGC
GTTCAAGGCG TAACCACCCG GCACGAATAC CAATACGACG ATCTTAAAGA CGATGGGGAG
TTTGCAGATC CGCAACAGGA AGACCAGGAA CTGCCCGAAG CGTACGCCCC GCGGGAACCG
GAAATCACCC GCATGAGCGA CACCATAAAA AGCGGAGATA CGCCTTCGAC GCTTCTGGAA
GGCCATCTCG GACTTCCCGA GATCTATTCC CTGTGCAACG AAAGCAAGGA CTTCTATCCC
CTGGACAATC TCAGGGCAGG CCAGCCCTGG ACCATGATCT ATTCCAACAA GGCCCTGATC
GGTCTGGAAT ATGAGATCGA TTCAAACGAA CGTCTGGTTG TTTCCCTGAC CGATTCCGGC
TATGAATTCC GACGCGAAGC CATCCCCTAC GAAACGGAAA CCAAAACCGT ATCGGGAGTG
GTCGAGAGCA GCCTGTTCGG AGCGGTGACC ACCGCCGGCG AAAGTGAGGA ACTGGCCCTG
CGGCTGGGCA ATGTTTTCGC CTATGACGTC GACTTCACGC GGGATCTGCG CACGGGTGAC
ACGTTCAAGG TCATCATCGA GAAGAAATCC AGGGAAGGCA AATTCGTCGG GTACGGACAA
CTCGCGGCAG CCAGTTTCAC CAACCAGGGG CAGACCTACT ACGCCTACCA ATACACGGAC
AAAAAAGGTA ACACGGCCTA TTACGACGAA AAAGGACGTC CGTTGCGCAA GGCCTTCCTC
AAATCACCGC TGCCCTTCAC GCGCATCTCC TCTGGCTATT CCATGAGCCG CCTGCACCCC
ATTCTGAAAT ACCGACGTCC GCACCAGGGC ATCGATTACG CCGCGCCCAC CGGAACCCCG
ATCAGCACGG TCGCCGACGG CATCATCGCG CAGGTCGGCT CCAACAAGTC CCAAGGCCGA
TTCGTACGCG TGATCCACAG CAACGGCTAT GAGACCATCT ACAATCACAT GAGCAAATTC
GCCAAAGTCT CCAAAAAAGG GGCGAAAGTG AAGCAGGGCG CGACCATCGG CTATGTCGGC
AGCACCGGAT ACGCCACCGG CCCGCATCTT GACTTCCGCA TGAGACAAAA CGGCAAGCTC
ATCAACCCCT TGAAGCTCAA GACGATGCCG GCAGACCCCA TTGCAAGCAA GGAAATGCCG
GCCTTCAAGG CTGTGGTGGC CGCGTACAAA GCCCAGCTCG AAGAGCCCGT GCAGTCCGCA
AAACTGGAGC AGGCCCCCGC ACCCAATCCA TAA
 
Protein sequence
MTKKNRHKFR RPANLSLKRK TASSRLTVPF FALLGATLIG AAIFFNFLAP NETQSSIDWS 
VQGVTTRHEY QYDDLKDDGE FADPQQEDQE LPEAYAPREP EITRMSDTIK SGDTPSTLLE
GHLGLPEIYS LCNESKDFYP LDNLRAGQPW TMIYSNKALI GLEYEIDSNE RLVVSLTDSG
YEFRREAIPY ETETKTVSGV VESSLFGAVT TAGESEELAL RLGNVFAYDV DFTRDLRTGD
TFKVIIEKKS REGKFVGYGQ LAAASFTNQG QTYYAYQYTD KKGNTAYYDE KGRPLRKAFL
KSPLPFTRIS SGYSMSRLHP ILKYRRPHQG IDYAAPTGTP ISTVADGIIA QVGSNKSQGR
FVRVIHSNGY ETIYNHMSKF AKVSKKGAKV KQGATIGYVG STGYATGPHL DFRMRQNGKL
INPLKLKTMP ADPIASKEMP AFKAVVAAYK AQLEEPVQSA KLEQAPAPNP