Gene Dbac_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2023 
Symbol 
ID8377698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2327045 
End bp2327545 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content55% 
IMG OID645001248 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_003158525 
Protein GI256829797 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000438494 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATC CGGTGGTCCT GGTGGATACG ACCAAAGGAG AATTTCTGGT TGAACTGTTC 
GCGGACAAGG CGCCGCTGAC TGTGGCCAAT TTTTTGAGTT ATGTGGATGA TGATTTCTAT
GTAGGCACCC TGTTTCACAG GGTCGTGAAA GGATTCATGA TCCAGGGTGG CGGACTCGAC
AACATGATGC GCGAAAAGCC CACCCGGCCG CCTGTCGCCA ACGAGGCCGC CAATGGCCTC
GAAAATCTCG AAGGCACCGT GGCCATGGCT CGCACCGCCG ATCCGCACAG CGCCTGCGCC
CAGTTTTTTG TCAACACGGT CGACAACCCG GACCTTGATC ACAAGGGCGA GGATGAGTTC
GGCTATTGCG TTTTCGGTCA GGTCATTGAC GGGATGGATG TGGTCAAGAA AATTGAAAAA
GTCCGGGTCA AACCCCAGGG CGATCACGAA CACGCACCCG CCGATCAGGT GTCCATTAAC
TCCATTACCC GTTTTGAATG A
 
Protein sequence
MSNPVVLVDT TKGEFLVELF ADKAPLTVAN FLSYVDDDFY VGTLFHRVVK GFMIQGGGLD 
NMMREKPTRP PVANEAANGL ENLEGTVAMA RTADPHSACA QFFVNTVDNP DLDHKGEDEF
GYCVFGQVID GMDVVKKIEK VRVKPQGDHE HAPADQVSIN SITRFE