Gene Dbac_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2006 
Symbol 
ID8377681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2306554 
End bp2307906 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content65% 
IMG OID645001232 
Productputrescine--2-oxoglutarate aminotransferase 
Protein accessionYP_003158509 
Protein GI256829781 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR03372] putrescine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGCG ACATCTCAAA GGCCCGGGCT GAAGCCCGTT TCATGCTCGA AGCCATCCAC 
ACCCCCGACG ACCAGCTGAC CCTGGAGCAA AGGCAGGACA TCGCCAGGAA GACCGTCGAG
AACTTCCGGG ACAACATCAA CAAGGGCTTT CTGAGCTACC GAAAATCCGT GACCCAGGCC
GAGGATTTCG CCTACACCGA ATGGCAGGGC CAGGGTTCGG TCATGCGCGA CGTGCTGGGC
CGGGAATTCA TCGACATTCT CGGCGGTTTC GGCCTCTACA GCCCCGGCAT CCGCCACCCC
AAGATCGTGG CCGCCGTCAA GGCCCAGCTC GACCGCTCCC CGCAATACAG CCAGGAAATG
CTCGACCCCC TGCGCGCCCA GCTGGCAAGG GTCATCGCGC TTTTGACCCC CGGAGATATC
CAGAACGGAT TTTTTGCCAA CAGCGGCACC GAGGCCGTGG ACGGGGCCAT GAAGCTGGCC
AAGATGTACA CGGGCAAAGC CGGTTTCATC TCCACCTTGA AGGGCTTTCA CGGCAAGTCC
CTGGGCGCGC TCTCGCTCCT GGGCAAGGCC GTGTACCGCG AACCGGCCAT GCCGCTCCTG
GAGAGCGTGA TCCACGTGGA ATTCGGCGAC GCCGAGCAGG TCGAGCGCGC CCTGTCCATC
GCCCGGGCCG TGGGCCAGGG GGTGGCCGCC GTGGTGGCCG AGCCCATCCA GGGCGAAGCC
GGGGCCGTGG TGCCGCCGGA CGACTACTGG CCGCGCCTGC GCGAGATCTG CGACCACTAC
GGCGTGCTGC TCATCGCCGA CGAGGTCCAG ACGGGCTTCG GCCGCACGGG CACGATCTTC
GGCGTGGACC ACTGGGACGT GACCCCGGAC ATCATGTGCT TCGGCAAGGC TCTCGGCGGC
GGCGTGGTGG CCATGAGCGC CTTCTTCGCC AAGGCCAGGA TCTGGGAATG CCTGACTCCC
AACCCCTTCA TGCACACCAC GACCACGGGG GGGAACCCGC TGGCCTGCGC GGCGGCCCTC
GCCCACATCG AGGTCATGCT CGATGAGGAC ACCCCCGGCC AGGCTCGGGA CAAGGGCGCG
TACGTCATGG GCAAGCTCAG CGAACTCAAG GGACTCTACC CCGGCATATT GGAGAGCATC
ACGGGCAAGG GCCTGCTGAT CGGCATGAAC TTCGTGGACG ACGAGATCGG CTACAAGGTC
GCGGCAGGAC TCTTCGCCCG CCGGGTGCTG ACCGCCGGGA CGCTGACCAA CGCGAAGGTC
ATCCGTTTCG AACCGGCCCT GACCATTTCC TATGAGCAGA TCGATGAAGT CTTGAACCGA
CTGGAAGACA CCTTCAAAAG CATCGCCGTG TAA
 
Protein sequence
MHRDISKARA EARFMLEAIH TPDDQLTLEQ RQDIARKTVE NFRDNINKGF LSYRKSVTQA 
EDFAYTEWQG QGSVMRDVLG REFIDILGGF GLYSPGIRHP KIVAAVKAQL DRSPQYSQEM
LDPLRAQLAR VIALLTPGDI QNGFFANSGT EAVDGAMKLA KMYTGKAGFI STLKGFHGKS
LGALSLLGKA VYREPAMPLL ESVIHVEFGD AEQVERALSI ARAVGQGVAA VVAEPIQGEA
GAVVPPDDYW PRLREICDHY GVLLIADEVQ TGFGRTGTIF GVDHWDVTPD IMCFGKALGG
GVVAMSAFFA KARIWECLTP NPFMHTTTTG GNPLACAAAL AHIEVMLDED TPGQARDKGA
YVMGKLSELK GLYPGILESI TGKGLLIGMN FVDDEIGYKV AAGLFARRVL TAGTLTNAKV
IRFEPALTIS YEQIDEVLNR LEDTFKSIAV