| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1999 |
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| Symbol | |
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| ID | 8377674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2297178 |
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| End bp | 2298899 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645001225 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_003158502 |
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| Protein GI | 256829774 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGACG TATCCCAGCT CCACTCCATC CTCGACTCCG TCAGCTATGC CATCGTGGCC
ATGGACCTGG ATGGCAAGGT CGTCCACCTC AATGAACGGG CCAGGGCCTT TCTCGAAGCC
CAGGGGCGCC GCTTCTCGGA CTGCGTAGGC CGAGACGTGG CCGAGTTCCT TCCCATCGCG
GCCCCGCTGG CCAAGGCCGC CCTCTCCACC GCGGCCTTCC GCAACGGCAC CGGACGCATC
GTGGACCGAG GCGTGAAGCT CTTTTTCGAA ATCACCCCGC ACATGCGCGA CGGCGAACTG
GCCGGGGCGA TCGTCAGCCT GCAGCGCCCC GAGCGCTTCG AGGAACTGGC CACCAAGCTC
GATTCACACC AGAAACTCCT GCAGACTTTT CAGGCCGTTT TCCAGGCCTC CAACGACGGC
ATCTGGGTCT GCGACGGAAG CGGCACGATC ATGTCCATCA ACAAAGCCTC CGAACGCCTG
AACGGCATCA GGGCCGAGGA TTTTCTGGGC AAAAACATGT CCGAGGTCGT GGCTGGCGGT
TTCGTGGACC AATCCGTGAC GCTCATGGTG CTCAAATCCA AGGCCCAGGC CAGCATCATC
CAAAGCGCGA CCAGCACGGG CAAGCAGCTG CTGGTCACCG GCACACCGAC CTTTGACGGA
AAGGGAAACG TGTCCCTGGT TGTGGTCAAC GAACGCGACC TGACCGAACT CAACATGCTG
CGCCGGGATC TGGACCAGGT TCAGCGCGAG CAGGCCAAGG TCAAGGACGA ACTGGCTGGA
GTGACCATGC TTGAACTGAA CTCCCAGGGC CTGGCCATGG AGAGTCCGGG CATGCGGCGC
GTGGTGGCCA AGGCCATGAA ACTCTCCCAC TTCAATACCT CGAAAATCCT CATCCTGGGC
GAGTCGGGCA CGGGCAAGAG CATGATGGCC AAGTTCATCC ATCAGAACAG CGCGCGCCGG
GACAGGCCGT TCATCTCCGT CAACTGCGCG GCCTTGCCCG AATCCCTGTT CGAGGCCGAG
CTGTTTGGGT ACGAGCGAGG AGCATTCACC GGGGCCCTCA AGGATGGCAA GGCAGGCCTT
CTGGAGGTTG CCCAGGACGG AACCTTCTTT CTGGACGAGG TCGGCGAGAC CCCACTGCAT
CTGCAGGCCA AACTGTTGAA ATGCCTGGAT GACAATGAAT TCACTCCCGT AGGCGGCACC
AGACCCAAGA AGATTCGCTG CTCCATCATC GCCGCCACCA ACCGCAACCT CGAAGAACAG
GTCAAGGCCA AGGCCTTTCG CAAAGATCTT TACTACCGCC TGAACGCCCT GGCGCTGGAG
ATCCCGCCCT TGCGCAGCCG CCCCGAGGAC GTGCTTGAGC TCACCGAAAA ATTCCTGACC
ATGTACAACG CCCAATACCA GACAGAGAAA CGCATCAGCC CCAAAGGCAT GGAGCTTTTG
CTGGGTCATT CCTATCCGGG CAATGCGCGC GAACTCAGAA ACCTGATCAA GCAGGCAGTG
GTCATGAGCG ACGAGGGTGT CATCGACGAG GCTCTTGGTA TTGCCATGAG CGGAGAAGCG
CAAAGCGAGG ACCTGAATCT AACCATAGCG GTGGAGAAAG TGGAGCGGGA GCTGCTCGCA
CGGGCCCGGA AGATCTACGG CAGCACGCGG GAAATCGCCC GCCACCTGGG CATCAGTCAG
CCCTCGGTCG TGCGCAAAAT GGGCAAGCAC AAAATCCGAT GA
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| Protein sequence | MPDVSQLHSI LDSVSYAIVA MDLDGKVVHL NERARAFLEA QGRRFSDCVG RDVAEFLPIA
APLAKAALST AAFRNGTGRI VDRGVKLFFE ITPHMRDGEL AGAIVSLQRP ERFEELATKL
DSHQKLLQTF QAVFQASNDG IWVCDGSGTI MSINKASERL NGIRAEDFLG KNMSEVVAGG
FVDQSVTLMV LKSKAQASII QSATSTGKQL LVTGTPTFDG KGNVSLVVVN ERDLTELNML
RRDLDQVQRE QAKVKDELAG VTMLELNSQG LAMESPGMRR VVAKAMKLSH FNTSKILILG
ESGTGKSMMA KFIHQNSARR DRPFISVNCA ALPESLFEAE LFGYERGAFT GALKDGKAGL
LEVAQDGTFF LDEVGETPLH LQAKLLKCLD DNEFTPVGGT RPKKIRCSII AATNRNLEEQ
VKAKAFRKDL YYRLNALALE IPPLRSRPED VLELTEKFLT MYNAQYQTEK RISPKGMELL
LGHSYPGNAR ELRNLIKQAV VMSDEGVIDE ALGIAMSGEA QSEDLNLTIA VEKVERELLA
RARKIYGSTR EIARHLGISQ PSVVRKMGKH KIR
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