| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1995 |
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| Symbol | |
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| ID | 8377669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2291840 |
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| End bp | 2293171 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645001221 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003158499 |
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| Protein GI | 256829771 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.194004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCAT TACTTCATCT ACTGCTGCTG CTTTTCGTGA TCCCGGCCTG CGCAGGCCAT
CAGGCAAACT CCTCGGCGGC ACAGGATAAA TGGCTGGCCC TGAACAGGGA ATTCATCGCG
CTTCACACCA AAGGCTCCTA TGACCAGGCC TTGACGGCGG CCCTGCAAGG AGTCGCGCTG
GCGCAGGGAT TCATGCCCAG GGATAACGCC GACCTGGCTA CATCGCTGAA CAATCTCGGC
GTGACGTACG CGGCCATGGG CAGGTTCGAG GAAGCCAGGG ACCCGCTGGA AAGAGCCCTG
GCCATGCGCG AAAAAGTACT GGGTCCCAAT CACATGGAAG TGGCCACGAC CCTAAGCAAT
CTCGGAGAAC TTTACGTGGA CATGAACCTG CCTTCCGACG CGGAAGATGC GTTCATCAGG
GCGCTTGAAA TCCGGGAGGC CGAACTTGGA TCCGAGAACG CCGATCTTGC CGAAACCCTG
AACAACCTTG GCGAACTCTA CCTTCGCAGA GGACTTCTCG ATCAGGGCGA CACATTGCTG
CGACGGGCGC TGGCCATCAG GGAGAACAAA CTGGGGCCCG GTCATCCGCA GGTCGCCCGC
ACCCTCGACA ATCTGGCCGC AATAGAACAG GCCCGCAAAA ACTATCCGCA GGCCCAGGAG
CTGCTGGAAC GATCGCTGCG CATCAAGGAA GCGGCCCTGG GACCTGATCA CCCCTGGCTG
GCCGTCACCC TGACCAGCCT GGCTGAAGTC CTCATGGCCC AAGGCATGAT CGCCGACGCC
GAACCTATGG CGCGCAGGGC CGTAAACATC GGAGAGGCGG CGTACGGCAG GGACGGCGTG
CGCATGGCCC TCCCCCTGGC GACCCTGGGC AACCTGATGC GAAGCCAGGG GCGGTTCGAC
GAAGCCGAAG AGATGCTCAC CCGTGCGCTG CACCTGCAAG AACAGGCGTT GCCGGCGGAT
CATCTCGACA TCGCAATTTC CCTTGGCAAC CTGGCCTCGG TTCATTATGC CCAAGGTCGC
TTTGCCGAGG CCAGGTCGGA TTATGAACGC GCGCTCGTCA TCAGCGAAGC AGGCCTAGGC
CAAAAGCATG GGGATGTAGC CCAGCTCCTG CATAATCTGG GAGTGGTGAA CCGCAAGCTC
GGCGATCTGG ATCAGGCCGG AACCTTGCTC ATGCAGGCCC TGTCCATCCG TGAAACTCTG
TTCGGCCCAT CGTCTCCCTC TGTGGCCGAC ACTCTGGAGG CGCTGGCTTT CACCGTGAAG
GATGCTGGCG ACACGGCTTC AGCCAGCGCA TATCTTGAGC GGGCCAAGGC CATCCGCGGA
CAGAAAGAGT GA
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| Protein sequence | MKPLLHLLLL LFVIPACAGH QANSSAAQDK WLALNREFIA LHTKGSYDQA LTAALQGVAL
AQGFMPRDNA DLATSLNNLG VTYAAMGRFE EARDPLERAL AMREKVLGPN HMEVATTLSN
LGELYVDMNL PSDAEDAFIR ALEIREAELG SENADLAETL NNLGELYLRR GLLDQGDTLL
RRALAIRENK LGPGHPQVAR TLDNLAAIEQ ARKNYPQAQE LLERSLRIKE AALGPDHPWL
AVTLTSLAEV LMAQGMIADA EPMARRAVNI GEAAYGRDGV RMALPLATLG NLMRSQGRFD
EAEEMLTRAL HLQEQALPAD HLDIAISLGN LASVHYAQGR FAEARSDYER ALVISEAGLG
QKHGDVAQLL HNLGVVNRKL GDLDQAGTLL MQALSIRETL FGPSSPSVAD TLEALAFTVK
DAGDTASASA YLERAKAIRG QKE
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