| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1993 |
|---|
| Symbol | |
|---|
| ID | 8377667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2288722 |
|---|
| End bp | 2289960 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645001219 |
|---|
| Product | aromatic hydrocarbon degradation membrane protein |
|---|
| Protein accession | YP_003158497 |
|---|
| Protein GI | 256829769 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2067] Long-chain fatty acid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.131408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGAT GGATTTTTGT GCTGTGCGTT GTTCTTTATC CATTGCAGGC ATGGGCCGCA
GGCTATGGCG TCTATGAGTG GAGCGCCAGG GGCAACGCTC TGGGCGGGGC CATGGTGGCC
CGGGACGGGG ACCCTTCGTC CGTGGCCTAC AATCCGGCCT GCATCACCGA CGTACCGGGC
AAGCAGATTC AGATCGGGGC CACGGCCATT GCACCTTCTG CGACCATGGA TGTGAAATCG
GATGCGGTGG AAGACATGGA CTTCGCGGAT TCGGTCTGGG CTTTGCCCAC CATGTATTAC
ACGCACCAGC TTTCGGACAA CTACTGGTTC GGGCTGGGCA TGTTCTCCCG GGTCGGACTG
GGTACCGAGT ACGAGGATGC CGATACCTGG GCGGGACGCT ACAACTGCTC CCGCGCGGCC
ATCAAGTCCG TCTCCATCAA TCCCAACATG GCCCTGAGGT TTTCCGACGC CTTTTCCCTG
GCCGTGGGCG TGGAGGCGAC ATATCTGGAT TTTGGATATG ATATGACCTT TAAGGCTCCG
GGTGTACCGA ACTCCGATTA CCTGCATGAA ATATCCGCCG ATGGATGGGG CTACGGCATG
AATCTCGGAG CGCGTTACAA ACCCTTCGAC TGGCTTGCGT TCGGCCTCAT GTGGCGCAGC
GAAATCCAGC TGACGGTGCA TGGCGATGGA GACTTTACGC AGAAGGGAAC AGTGCCTCTT
TCTTTCAAGA GCACGGATGT TACCGGCACC GAGCCCATTC CCGAGTCCGT GACCATGGGG
GTGATGGTCA AGCCCATGGA GCGCCTTAGT CTGGAATTCG ATGCGGTGTG GACCAGGTGG
AGTTCCTACA AATCTTTGAT CGTCAATTAT GATGACCCGC AACCCGGATT CGGCGACAAG
CTGGAAAGTA CCAAAAATTG GCACAACACC TGGAGATTCC AGTTCGGCGC CGAGTACGCA
TTGACCGATA GCATCGATCT GCGCGCGGGC TACGTTTACG ACCAGTCTCC GGTCAATGAC
GATTATGAGG ATTATGCCGT GCCCTGTACG GACCGGCAGA TTGTGACCCT GGGCACCGGC
TGGAAGATAA ACGAAGCCTG GGCCGTGGAC GCGTCCTACG GCTATCTTTG GATGAAGGAT
CGAGATTATG AGGCCAGACC CAAAGCAGGC ATCCTCGAAC TGACCCGTGA AGACGCCAGT
GCCCACATGG CGGGCTTGAG CGTGACGTAT AAATTCTGA
|
|---|
| Protein sequence | MRRWIFVLCV VLYPLQAWAA GYGVYEWSAR GNALGGAMVA RDGDPSSVAY NPACITDVPG
KQIQIGATAI APSATMDVKS DAVEDMDFAD SVWALPTMYY THQLSDNYWF GLGMFSRVGL
GTEYEDADTW AGRYNCSRAA IKSVSINPNM ALRFSDAFSL AVGVEATYLD FGYDMTFKAP
GVPNSDYLHE ISADGWGYGM NLGARYKPFD WLAFGLMWRS EIQLTVHGDG DFTQKGTVPL
SFKSTDVTGT EPIPESVTMG VMVKPMERLS LEFDAVWTRW SSYKSLIVNY DDPQPGFGDK
LESTKNWHNT WRFQFGAEYA LTDSIDLRAG YVYDQSPVND DYEDYAVPCT DRQIVTLGTG
WKINEAWAVD ASYGYLWMKD RDYEARPKAG ILELTREDAS AHMAGLSVTY KF
|
|---|
| |