Gene Dbac_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1990 
Symbol 
ID8377664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2284520 
End bp2286553 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content57% 
IMG OID645001216 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003158494 
Protein GI256829766 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.871736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATCCT TTTTTGCCAG ATTCAAATTC GAGACAAAGC TCAATCTGGG CATCATCGCC 
ATCGTGCTTG GCATGGCGGC AGTCCTGTTG CCCGTTGTGT CCAAAATGAC GTCCTCGGCT
CTGGTGGCGG AGAACAAGCT GCGCGGGGCC GCCCTGGTCG AGAGCCTCGC CGCCCGCGCC
GTGAATCCGC TTTTGGCCCA GGATTATCTG GTCCTTAGAA ATCTGGTCAG CGAAATTGGC
GATGTGGTTT ATGCTTTTGT CCAGAACGCG GACAACCGGG TCGTCACCCA CTCCTTCGTC
AAGGGTTACC CCGTCGAATT GGTGGGGGCC AACAGCGTTG GCAGCGATGA ACGGGTGCAT
GTCCAGCTCA TCGATACGGG GCAGATATTC GTCTACGATT TCGCAGCGCC TATAATGGTC
GCCGGAGAGC GTATCGGGAC AGTACGGATC GGCCTGTCCA AGTCCCGCTT GAACGCAACC
ACCAAGCAAT TCGTATCGGC CCTGGCGACC ATGTTCGGCG GGGTGCTGCT TGCGGCCATG
GCCCTGGGCA GCGTTTTTGC CCGCACAGTG ACCCGCCGCC TGGCCAAGCT TCGCGCTCAT
GCCGAAGATC TGGTCACGGG GAGCCTCGAC AACCTGTCCG TGTTACCGGG CGAGCATTTC
TGCTGGGAAA TCATGAATTG CACGGAGACA AGCTGTCCGG CCCATCATGA CCGCGTACGT
CGTTGCTGGC TGGTGCCGGA CACGAAATGT GCCGGTCATG CCTGTATAAT CGGGCCGAAG
CCCTCAAGTT GCCGGGATTG TCCTGTTTTT CTGCAGAATG TGGGTGATGA AATTCAGGAC
CTGGCCGAAT CGCTGGATTT TATGGCCTTT ACCCTGCGCG ACCACATCCG CGGCCTGCGC
GAGGCCGAGC AGACTCTGAC CAACCAGCAA CGGCTTTTGT CCACGGTGCT GGACATGAAC
CCCGACCTCA TTTCCCTGGT GGACACGCGC ATGATTTATC AGACGTCCAA CCGAGCTTTT
GCGCAGAGCG TGGGGAAGAC CGTGGCTGAA ATCCGGGGGC TCAACGATTT TCACCTTTTT
TCGGAGGAAG AGGCGGAGCG CAGAAATCTC GAAGGGCGGG AGGTGCTCAT CACCGGTGAG
CGCGTGGACA GGCAGGAGCG CGTCGATGGC CCGGGTGGGC GCAAATGGTT TCATGTGGTC
CAGATTCCGG TGCACGACGA GTCGGGTCGC ATTGTCAGCC TGTTGCGCAT GGATCGGGAT
GTTACCGATA TCAAGGAATA TGAGCAGCAG CTTATCCAGG CGCAAAAAAT GGAATCCATC
GGCAAGCTGG CCGGAGGCGT GGCGCATGAG ATCAACACTC CCCTTGGCAT CATCCTCGGA
TATGCGCAGC TCCTGAAAGA GGATGTGCCC GCTGACGGCC AGATGAGTCA GGATCTGGCG
GTCATCGAGA AACAGGCCAA GGTCTGCCGC AAGATCGTGG CCGACCTGCT GGGCTTTTCC
CGCCAGGGCC AGACTGATAA GCGCGAGATG TGCTTCAATA ATTCGGTCAT GGAATCAGTA
AGTCTGGTTC GACATTCCTT TGAAATGGAC AGGGTGCGGA TCGTGACCAG GCTTGATGAC
AGTTTTCCCA TCATTTACGG AGACCCGGAA AAGTTGAAGC AGGTCTGGAT CAATCTGCTC
AACAACGCAA AAGATGCCAT GCCCGAGAGC GGAGGCGTCA TCGTCGTGGT CACCAAACTT
AGGACGCCTC TTGGGATAGT GACGCTTGAG GTCGCTGACA GCGGCACCGG CATTGACGAA
GTGTCTTTGA AGAAGATTTT TGATCCTTTC TACACCACCA AGGCGGTGGA CAAGGGAACG
GGGCTCGGGC TGTCCGTGTC CTTTGGCATC GTCAAGGATC ATATGGGCGA CATTCGCGCG
GACAGCCCGT TGCCGGCGGA TTTCGACCTT CCTCCTTTGC CGGAGGGGGC CGTGAAGGGA
CCGGGAACAA TCTTTACTGT TGATATTCCC CTGGATCACG GATCCGAATA TTAG
 
Protein sequence
MKSFFARFKF ETKLNLGIIA IVLGMAAVLL PVVSKMTSSA LVAENKLRGA ALVESLAARA 
VNPLLAQDYL VLRNLVSEIG DVVYAFVQNA DNRVVTHSFV KGYPVELVGA NSVGSDERVH
VQLIDTGQIF VYDFAAPIMV AGERIGTVRI GLSKSRLNAT TKQFVSALAT MFGGVLLAAM
ALGSVFARTV TRRLAKLRAH AEDLVTGSLD NLSVLPGEHF CWEIMNCTET SCPAHHDRVR
RCWLVPDTKC AGHACIIGPK PSSCRDCPVF LQNVGDEIQD LAESLDFMAF TLRDHIRGLR
EAEQTLTNQQ RLLSTVLDMN PDLISLVDTR MIYQTSNRAF AQSVGKTVAE IRGLNDFHLF
SEEEAERRNL EGREVLITGE RVDRQERVDG PGGRKWFHVV QIPVHDESGR IVSLLRMDRD
VTDIKEYEQQ LIQAQKMESI GKLAGGVAHE INTPLGIILG YAQLLKEDVP ADGQMSQDLA
VIEKQAKVCR KIVADLLGFS RQGQTDKREM CFNNSVMESV SLVRHSFEMD RVRIVTRLDD
SFPIIYGDPE KLKQVWINLL NNAKDAMPES GGVIVVVTKL RTPLGIVTLE VADSGTGIDE
VSLKKIFDPF YTTKAVDKGT GLGLSVSFGI VKDHMGDIRA DSPLPADFDL PPLPEGAVKG
PGTIFTVDIP LDHGSEY