| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1990 |
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| Symbol | |
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| ID | 8377664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2284520 |
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| End bp | 2286553 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645001216 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003158494 |
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| Protein GI | 256829766 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.871736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATCCT TTTTTGCCAG ATTCAAATTC GAGACAAAGC TCAATCTGGG CATCATCGCC
ATCGTGCTTG GCATGGCGGC AGTCCTGTTG CCCGTTGTGT CCAAAATGAC GTCCTCGGCT
CTGGTGGCGG AGAACAAGCT GCGCGGGGCC GCCCTGGTCG AGAGCCTCGC CGCCCGCGCC
GTGAATCCGC TTTTGGCCCA GGATTATCTG GTCCTTAGAA ATCTGGTCAG CGAAATTGGC
GATGTGGTTT ATGCTTTTGT CCAGAACGCG GACAACCGGG TCGTCACCCA CTCCTTCGTC
AAGGGTTACC CCGTCGAATT GGTGGGGGCC AACAGCGTTG GCAGCGATGA ACGGGTGCAT
GTCCAGCTCA TCGATACGGG GCAGATATTC GTCTACGATT TCGCAGCGCC TATAATGGTC
GCCGGAGAGC GTATCGGGAC AGTACGGATC GGCCTGTCCA AGTCCCGCTT GAACGCAACC
ACCAAGCAAT TCGTATCGGC CCTGGCGACC ATGTTCGGCG GGGTGCTGCT TGCGGCCATG
GCCCTGGGCA GCGTTTTTGC CCGCACAGTG ACCCGCCGCC TGGCCAAGCT TCGCGCTCAT
GCCGAAGATC TGGTCACGGG GAGCCTCGAC AACCTGTCCG TGTTACCGGG CGAGCATTTC
TGCTGGGAAA TCATGAATTG CACGGAGACA AGCTGTCCGG CCCATCATGA CCGCGTACGT
CGTTGCTGGC TGGTGCCGGA CACGAAATGT GCCGGTCATG CCTGTATAAT CGGGCCGAAG
CCCTCAAGTT GCCGGGATTG TCCTGTTTTT CTGCAGAATG TGGGTGATGA AATTCAGGAC
CTGGCCGAAT CGCTGGATTT TATGGCCTTT ACCCTGCGCG ACCACATCCG CGGCCTGCGC
GAGGCCGAGC AGACTCTGAC CAACCAGCAA CGGCTTTTGT CCACGGTGCT GGACATGAAC
CCCGACCTCA TTTCCCTGGT GGACACGCGC ATGATTTATC AGACGTCCAA CCGAGCTTTT
GCGCAGAGCG TGGGGAAGAC CGTGGCTGAA ATCCGGGGGC TCAACGATTT TCACCTTTTT
TCGGAGGAAG AGGCGGAGCG CAGAAATCTC GAAGGGCGGG AGGTGCTCAT CACCGGTGAG
CGCGTGGACA GGCAGGAGCG CGTCGATGGC CCGGGTGGGC GCAAATGGTT TCATGTGGTC
CAGATTCCGG TGCACGACGA GTCGGGTCGC ATTGTCAGCC TGTTGCGCAT GGATCGGGAT
GTTACCGATA TCAAGGAATA TGAGCAGCAG CTTATCCAGG CGCAAAAAAT GGAATCCATC
GGCAAGCTGG CCGGAGGCGT GGCGCATGAG ATCAACACTC CCCTTGGCAT CATCCTCGGA
TATGCGCAGC TCCTGAAAGA GGATGTGCCC GCTGACGGCC AGATGAGTCA GGATCTGGCG
GTCATCGAGA AACAGGCCAA GGTCTGCCGC AAGATCGTGG CCGACCTGCT GGGCTTTTCC
CGCCAGGGCC AGACTGATAA GCGCGAGATG TGCTTCAATA ATTCGGTCAT GGAATCAGTA
AGTCTGGTTC GACATTCCTT TGAAATGGAC AGGGTGCGGA TCGTGACCAG GCTTGATGAC
AGTTTTCCCA TCATTTACGG AGACCCGGAA AAGTTGAAGC AGGTCTGGAT CAATCTGCTC
AACAACGCAA AAGATGCCAT GCCCGAGAGC GGAGGCGTCA TCGTCGTGGT CACCAAACTT
AGGACGCCTC TTGGGATAGT GACGCTTGAG GTCGCTGACA GCGGCACCGG CATTGACGAA
GTGTCTTTGA AGAAGATTTT TGATCCTTTC TACACCACCA AGGCGGTGGA CAAGGGAACG
GGGCTCGGGC TGTCCGTGTC CTTTGGCATC GTCAAGGATC ATATGGGCGA CATTCGCGCG
GACAGCCCGT TGCCGGCGGA TTTCGACCTT CCTCCTTTGC CGGAGGGGGC CGTGAAGGGA
CCGGGAACAA TCTTTACTGT TGATATTCCC CTGGATCACG GATCCGAATA TTAG
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| Protein sequence | MKSFFARFKF ETKLNLGIIA IVLGMAAVLL PVVSKMTSSA LVAENKLRGA ALVESLAARA
VNPLLAQDYL VLRNLVSEIG DVVYAFVQNA DNRVVTHSFV KGYPVELVGA NSVGSDERVH
VQLIDTGQIF VYDFAAPIMV AGERIGTVRI GLSKSRLNAT TKQFVSALAT MFGGVLLAAM
ALGSVFARTV TRRLAKLRAH AEDLVTGSLD NLSVLPGEHF CWEIMNCTET SCPAHHDRVR
RCWLVPDTKC AGHACIIGPK PSSCRDCPVF LQNVGDEIQD LAESLDFMAF TLRDHIRGLR
EAEQTLTNQQ RLLSTVLDMN PDLISLVDTR MIYQTSNRAF AQSVGKTVAE IRGLNDFHLF
SEEEAERRNL EGREVLITGE RVDRQERVDG PGGRKWFHVV QIPVHDESGR IVSLLRMDRD
VTDIKEYEQQ LIQAQKMESI GKLAGGVAHE INTPLGIILG YAQLLKEDVP ADGQMSQDLA
VIEKQAKVCR KIVADLLGFS RQGQTDKREM CFNNSVMESV SLVRHSFEMD RVRIVTRLDD
SFPIIYGDPE KLKQVWINLL NNAKDAMPES GGVIVVVTKL RTPLGIVTLE VADSGTGIDE
VSLKKIFDPF YTTKAVDKGT GLGLSVSFGI VKDHMGDIRA DSPLPADFDL PPLPEGAVKG
PGTIFTVDIP LDHGSEY
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