Gene Dbac_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1979 
Symbol 
ID8377653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp2272121 
End bp2272783 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID645001205 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003158483 
Protein GI256829755 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.053401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTA AAAATTTGCT AAAAAGAAGA GTTTTGCGAG ACGATGTTGC GGAATACTTG 
ATGGAATCCA TTCTCAAAGG GGATCTCAAC CCTGGAGACA AAATAATCGA ATCAAAATTG 
GCAAGAGAAC TGTCCATCAG CCAAGGCGCA GTACGAGAGG CCATCCGCGA CCTCATCGCT 
CAAGGCGTAT TGGAGACGGA ACCCTACAAG GGAACGCGCA TACGGACCCT CACGAAAGAA 
CAGCTCAATG ATTACTATGA CGTACGCACG GAAATTGAAG CGCTGGCTGT GAGATGGAGC 
ATCATCAAAC ATGAATCTAA ATATCTTGAT CTCGCCTTTT TAAAAAGCTG CGTGGACAAT 
ATGAAAATCT GCGTCGATAA CAATGACTCG AAAAACATGC GAAAACACGA CATGGCTTTT 
CATTTGGCCA TAGTCCAAGC AGCGCATAGC GAATCACTTG AAAAAGCGTG GAACTCACTG 
GGAAATTACT ACTGGACCTA CATTGCGGTT TACTACGACC ATGCCGCTTC ATTGCTGCAA 
GCTCAAGTCG TAAAACACCA AACCATGTAC GAAGCCATCG CAGCAGCCGA CATCAACGCC 
TACGCGAACT GTGTACGCGG CCACTACTTC GATACTGACC AACTCTTTCC AGAAAAGAAA 
TAA
 
Protein sequence
METKNLLKRR VLRDDVAEYL MESILKGDLN PGDKIIESKL ARELSISQGA VREAIRDLIA 
QGVLETEPYK GTRIRTLTKE QLNDYYDVRT EIEALAVRWS IIKHESKYLD LAFLKSCVDN 
MKICVDNNDS KNMRKHDMAF HLAIVQAAHS ESLEKAWNSL GNYYWTYIAV YYDHAASLLQ 
AQVVKHQTMY EAIAAADINA YANCVRGHYF DTDQLFPEKK